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Computer visualization of three-dimensional image data using IMOD.
Kremer JR, Mastronarde DN, McIntosh JR. Kremer JR, et al. Among authors: mastronarde dn. J Struct Biol. 1996 Jan-Feb;116(1):71-6. doi: 10.1006/jsbi.1996.0013. J Struct Biol. 1996. PMID: 8742726
Software tools for automated transmission electron microscopy.
Schorb M, Haberbosch I, Hagen WJH, Schwab Y, Mastronarde DN. Schorb M, et al. Among authors: mastronarde dn. Nat Methods. 2019 Jun;16(6):471-477. doi: 10.1038/s41592-019-0396-9. Epub 2019 May 13. Nat Methods. 2019. PMID: 31086343 Free PMC article. Review.
Clustering and variance maps for cryo-electron tomography using wedge-masked differences.
Heumann JM, Hoenger A, Mastronarde DN. Heumann JM, et al. Among authors: mastronarde dn. J Struct Biol. 2011 Sep;175(3):288-99. doi: 10.1016/j.jsb.2011.05.011. Epub 2011 May 17. J Struct Biol. 2011. PMID: 21616153 Free PMC article.
CTF determination and correction for low dose tomographic tilt series.
Xiong Q, Morphew MK, Schwartz CL, Hoenger AH, Mastronarde DN. Xiong Q, et al. Among authors: mastronarde dn. J Struct Biol. 2009 Dec;168(3):378-87. doi: 10.1016/j.jsb.2009.08.016. Epub 2009 Sep 2. J Struct Biol. 2009. PMID: 19732834 Free PMC article.
Three-dimensional ultrastructure of Saccharomyces cerevisiae meiotic spindles.
Winey M, Morgan GP, Straight PD, Giddings TH Jr, Mastronarde DN. Winey M, et al. Among authors: mastronarde dn. Mol Biol Cell. 2005 Mar;16(3):1178-88. doi: 10.1091/mbc.e04-09-0765. Epub 2005 Jan 5. Mol Biol Cell. 2005. PMID: 15635095 Free PMC article.
A fast reconstruction algorithm for electron microscope tomography.
Sandberg K, Mastronarde DN, Beylkin G. Sandberg K, et al. Among authors: mastronarde dn. J Struct Biol. 2003 Oct-Nov;144(1-2):61-72. doi: 10.1016/j.jsb.2003.09.013. J Struct Biol. 2003. PMID: 14643209
Automated tilt series alignment and tomographic reconstruction in IMOD.
Mastronarde DN, Held SR. Mastronarde DN, et al. J Struct Biol. 2017 Feb;197(2):102-113. doi: 10.1016/j.jsb.2016.07.011. Epub 2016 Jul 19. J Struct Biol. 2017. PMID: 27444392 Free PMC article.
The challenge of determining handedness in electron tomography and the use of DNA origami gold nanoparticle helices as molecular standards.
Briegel A, Pilhofer M, Mastronarde DN, Jensen GJ. Briegel A, et al. Among authors: mastronarde dn. J Struct Biol. 2013 Jul;183(1):95-8. doi: 10.1016/j.jsb.2013.04.008. Epub 2013 Apr 30. J Struct Biol. 2013. PMID: 23639902 Free PMC article.
The three-dimensional arrangement of intermediate filaments in Romney wool cortical cells.
Caldwell JP, Mastronarde DN, Woods JL, Bryson WG. Caldwell JP, et al. Among authors: mastronarde dn. J Struct Biol. 2005 Sep;151(3):298-305. doi: 10.1016/j.jsb.2005.07.002. J Struct Biol. 2005. PMID: 16125413
Automated electron microscope tomography using robust prediction of specimen movements.
Mastronarde DN. Mastronarde DN. J Struct Biol. 2005 Oct;152(1):36-51. doi: 10.1016/j.jsb.2005.07.007. J Struct Biol. 2005. PMID: 16182563
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