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Integrative Analysis of -Omics Data: A Method Comparison.
Tomescu OA, Mattanovich D, Thallinger GG. Tomescu OA, et al. Biomed Tech (Berl). 2013 Aug;58 Suppl 1:/j/bmte.2013.58.issue-s1-M/bmt-2013-4311/bmt-2013-4311.xml. doi: 10.1515/bmt-2013-4311. Epub 2013 Sep 7. Biomed Tech (Berl). 2013. PMID: 24043020 No abstract available.
Integrative omics analysis. A study based on Plasmodium falciparum mRNA and protein data.
Tomescu OA, Mattanovich D, Thallinger GG. Tomescu OA, et al. BMC Syst Biol. 2014;8 Suppl 2(Suppl 2):S4. doi: 10.1186/1752-0509-8-S2-S4. Epub 2014 Mar 13. BMC Syst Biol. 2014. PMID: 25033389 Free PMC article.
GoldenPiCS: a Golden Gate-derived modular cloning system for applied synthetic biology in the yeast Pichia pastoris.
Prielhofer R, Barrero JJ, Steuer S, Gassler T, Zahrl R, Baumann K, Sauer M, Mattanovich D, Gasser B, Marx H. Prielhofer R, et al. BMC Syst Biol. 2017 Dec 8;11(1):123. doi: 10.1186/s12918-017-0492-3. BMC Syst Biol. 2017. PMID: 29221460 Free PMC article.
A multi-level study of recombinant Pichia pastoris in different oxygen conditions.
Baumann K, Carnicer M, Dragosits M, Graf AB, Stadlmann J, Jouhten P, Maaheimo H, Gasser B, Albiol J, Mattanovich D, Ferrer P. Baumann K, et al. BMC Syst Biol. 2010 Oct 22;4:141. doi: 10.1186/1752-0509-4-141. BMC Syst Biol. 2010. PMID: 20969759 Free PMC article.
Detection and Elimination of Cellular Bottlenecks in Protein-Producing Yeasts.
Zahrl RJ, Gasser B, Mattanovich D, Ferrer P. Zahrl RJ, et al. Methods Mol Biol. 2019;1923:75-95. doi: 10.1007/978-1-4939-9024-5_2. Methods Mol Biol. 2019. PMID: 30737735 Review.
An efficient tool for metabolic pathway construction and gene integration for Aspergillus niger.
Sarkari P, Marx H, Blumhoff ML, Mattanovich D, Sauer M, Steiger MG. Sarkari P, et al. Bioresour Technol. 2017 Dec;245(Pt B):1327-1333. doi: 10.1016/j.biortech.2017.05.004. Epub 2017 May 4. Bioresour Technol. 2017. PMID: 28533066
Complete genome sequence and transcriptome regulation of the pentose utilizing yeast Sugiyamaella lignohabitans.
Bellasio M, Peymann A, Steiger MG, Valli M, Sipiczki M, Sauer M, Graf AB, Marx H, Mattanovich D. Bellasio M, et al. FEMS Yeast Res. 2016 Jun;16(4):fow037. doi: 10.1093/femsyr/fow037. Epub 2016 Apr 17. FEMS Yeast Res. 2016. PMID: 27189363
Identification of microRNAs specific for high producer CHO cell lines using steady-state cultivation.
Maccani A, Hackl M, Leitner C, Steinfellner W, Graf AB, Tatto NE, Karbiener M, Scheideler M, Grillari J, Mattanovich D, Kunert R, Borth N, Grabherr R, Ernst W. Maccani A, et al. Appl Microbiol Biotechnol. 2014 Sep;98(17):7535-48. doi: 10.1007/s00253-014-5911-4. Epub 2014 Jul 23. Appl Microbiol Biotechnol. 2014. PMID: 25052466 Free PMC article.
Engineering of protein folding and secretion-strategies to overcome bottlenecks for efficient production of recombinant proteins.
Delic M, Göngrich R, Mattanovich D, Gasser B. Delic M, et al. Antioxid Redox Signal. 2014 Jul 20;21(3):414-37. doi: 10.1089/ars.2014.5844. Epub 2014 Mar 24. Antioxid Redox Signal. 2014. PMID: 24483278 Review.
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