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27 results
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fpocket: online tools for protein ensemble pocket detection and tracking.
Schmidtke P, Le Guilloux V, Maupetit J, Tufféry P. Schmidtke P, et al. Among authors: maupetit j. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W582-9. doi: 10.1093/nar/gkq383. Epub 2010 May 16. Nucleic Acids Res. 2010. PMID: 20478829 Free PMC article.
SA-Mot: a web server for the identification of motifs of interest extracted from protein loops.
Regad L, Saladin A, Maupetit J, Geneix C, Camproux AC. Regad L, et al. Among authors: maupetit j. Nucleic Acids Res. 2011 Jul;39(Web Server issue):W203-9. doi: 10.1093/nar/gkr410. Epub 2011 Jun 10. Nucleic Acids Res. 2011. PMID: 21665924 Free PMC article.
Mobyle: a new full web bioinformatics framework.
Néron B, Ménager H, Maufrais C, Joly N, Maupetit J, Letort S, Carrere S, Tuffery P, Letondal C. Néron B, et al. Among authors: maupetit j. Bioinformatics. 2009 Nov 15;25(22):3005-11. doi: 10.1093/bioinformatics/btp493. Epub 2009 Aug 17. Bioinformatics. 2009. PMID: 19689959 Free PMC article.
PEP-FOLD: an updated de novo structure prediction server for both linear and disulfide bonded cyclic peptides.
Thévenet P, Shen Y, Maupetit J, Guyon F, Derreumaux P, Tufféry P. Thévenet P, et al. Among authors: maupetit j. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W288-93. doi: 10.1093/nar/gks419. Epub 2012 May 11. Nucleic Acids Res. 2012. PMID: 22581768 Free PMC article.
PEP-FOLD: an online resource for de novo peptide structure prediction.
Maupetit J, Derreumaux P, Tuffery P. Maupetit J, et al. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W498-503. doi: 10.1093/nar/gkp323. Epub 2009 May 11. Nucleic Acids Res. 2009. PMID: 19433514 Free PMC article.
SABBAC: online Structural Alphabet-based protein BackBone reconstruction from Alpha-Carbon trace.
Maupetit J, Gautier R, Tufféry P. Maupetit J, et al. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W147-51. doi: 10.1093/nar/gkl289. Nucleic Acids Res. 2006. PMID: 16844979 Free PMC article.
The FAF-Drugs2 server: a multistep engine to prepare electronic chemical compound collections.
Lagorce D, Maupetit J, Baell J, Sperandio O, Tufféry P, Miteva MA, Galons H, Villoutreix BO. Lagorce D, et al. Among authors: maupetit j. Bioinformatics. 2011 Jul 15;27(14):2018-20. doi: 10.1093/bioinformatics/btr333. Epub 2011 Jun 2. Bioinformatics. 2011. PMID: 21636592
Improved PEP-FOLD Approach for Peptide and Miniprotein Structure Prediction.
Shen Y, Maupetit J, Derreumaux P, Tufféry P. Shen Y, et al. Among authors: maupetit j. J Chem Theory Comput. 2014 Oct 14;10(10):4745-58. doi: 10.1021/ct500592m. J Chem Theory Comput. 2014. PMID: 26588162
A coarse-grained protein force field for folding and structure prediction.
Maupetit J, Tuffery P, Derreumaux P. Maupetit J, et al. Proteins. 2007 Nov 1;69(2):394-408. doi: 10.1002/prot.21505. Proteins. 2007. PMID: 17600832
A fast method for large-scale de novo peptide and miniprotein structure prediction.
Maupetit J, Derreumaux P, Tufféry P. Maupetit J, et al. J Comput Chem. 2010 Mar;31(4):726-38. doi: 10.1002/jcc.21365. J Comput Chem. 2010. PMID: 19569182
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