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220 results
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Determining chemotactic responses by two subsurface microaerophiles using a simplified capillary assay method.
Mazumder R, Phelps TJ, Krieg NR, Benoit RE. Mazumder R, et al. J Microbiol Methods. 1999 Sep;37(3):255-63. doi: 10.1016/s0167-7012(99)00072-x. J Microbiol Methods. 1999. PMID: 10480269
Low-substrate regulated microaerophilic behavior as a stress response of aquatic and soil bacteria.
Mazumder R, Pinkart HC, Alban PS, Phelps TJ, Benoit RE. Mazumder R, et al. Curr Microbiol. 2000 Aug;41(2):79-83. doi: 10.1007/s002840010097. Curr Microbiol. 2000. PMID: 10856370
An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data.
Zhang C, Crasta O, Cammer S, Will R, Kenyon R, Sullivan D, Yu Q, Sun W, Jha R, Liu D, Xue T, Zhang Y, Moore M, McGarvey P, Huang H, Chen Y, Zhang J, Mazumder R, Wu C, Sobral B. Zhang C, et al. Among authors: mazumder r. Nucleic Acids Res. 2008 Jan;36(Database issue):D884-91. doi: 10.1093/nar/gkm903. Epub 2007 Nov 4. Nucleic Acids Res. 2008. PMID: 17984082 Free PMC article.
A comprehensive protein-centric ID mapping service for molecular data integration.
Huang H, McGarvey PB, Suzek BE, Mazumder R, Zhang J, Chen Y, Wu CH. Huang H, et al. Among authors: mazumder r. Bioinformatics. 2011 Apr 15;27(8):1190-1. doi: 10.1093/bioinformatics/btr101. Bioinformatics. 2011. PMID: 21478197 Free PMC article.
PIRSF: family classification system at the Protein Information Resource.
Wu CH, Nikolskaya A, Huang H, Yeh LS, Natale DA, Vinayaka CR, Hu ZZ, Mazumder R, Kumar S, Kourtesis P, Ledley RS, Suzek BE, Arminski L, Chen Y, Zhang J, Cardenas JL, Chung S, Castro-Alvear J, Dinkov G, Barker WC. Wu CH, et al. Among authors: mazumder r. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D112-4. doi: 10.1093/nar/gkh097. Nucleic Acids Res. 2004. PMID: 14681371 Free PMC article.
MMDB: Entrez's 3D-structure database.
Chen J, Anderson JB, DeWeese-Scott C, Fedorova ND, Geer LY, He S, Hurwitz DI, Jackson JD, Jacobs AR, Lanczycki CJ, Liebert CA, Liu C, Madej T, Marchler-Bauer A, Marchler GH, Mazumder R, Nikolskaya AN, Rao BS, Panchenko AR, Shoemaker BA, Simonyan V, Song JS, Thiessen PA, Vasudevan S, Wang Y, Yamashita RA, Yin JJ, Bryant SH. Chen J, et al. Among authors: mazumder r. Nucleic Acids Res. 2003 Jan 1;31(1):474-7. doi: 10.1093/nar/gkg086. Nucleic Acids Res. 2003. PMID: 12520055 Free PMC article.
The Universal Protein Resource (UniProt): an expanding universe of protein information.
Wu CH, Apweiler R, Bairoch A, Natale DA, Barker WC, Boeckmann B, Ferro S, Gasteiger E, Huang H, Lopez R, Magrane M, Martin MJ, Mazumder R, O'Donovan C, Redaschi N, Suzek B. Wu CH, et al. Among authors: mazumder r. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D187-91. doi: 10.1093/nar/gkj161. Nucleic Acids Res. 2006. PMID: 16381842 Free PMC article.
Systems integration of biodefense omics data for analysis of pathogen-host interactions and identification of potential targets.
McGarvey PB, Huang H, Mazumder R, Zhang J, Chen Y, Zhang C, Cammer S, Will R, Odle M, Sobral B, Moore M, Wu CH. McGarvey PB, et al. Among authors: mazumder r. PLoS One. 2009 Sep 25;4(9):e7162. doi: 10.1371/journal.pone.0007162. PLoS One. 2009. PMID: 19779614 Free PMC article.
BioXpress: an integrated RNA-seq-derived gene expression database for pan-cancer analysis.
Wan Q, Dingerdissen H, Fan Y, Gulzar N, Pan Y, Wu TJ, Yan C, Zhang H, Mazumder R. Wan Q, et al. Among authors: mazumder r. Database (Oxford). 2015 Mar 28;2015:bav019. doi: 10.1093/database/bav019. Print 2015. Database (Oxford). 2015. PMID: 25819073 Free PMC article.
GeneOrder: comparing the order of genes in small genomes.
Mazumder R, Kolaskar A, Seto D. Mazumder R, et al. Bioinformatics. 2001 Feb;17(2):162-6. doi: 10.1093/bioinformatics/17.2.162. Bioinformatics. 2001. PMID: 11238072
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