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The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes.
Wade CH, Umbarger MA, McAlear MA. Wade CH, et al. Among authors: mcalear ma. Yeast. 2006 Mar;23(4):293-306. doi: 10.1002/yea.1353. Yeast. 2006. PMID: 16544271 Free article.
Dissecting the cis and trans elements that regulate adjacent-gene coregulation in Saccharomyces cerevisiae.
Arnone JT, Arace JR, Soorneedi AR, Citino TT, Kamitaki TL, McAlear MA. Arnone JT, et al. Among authors: mcalear ma. Eukaryot Cell. 2014 Jun;13(6):738-48. doi: 10.1128/EC.00317-13. Epub 2014 Apr 4. Eukaryot Cell. 2014. PMID: 24706020 Free PMC article.
The adjacent positioning of co-regulated gene pairs is widely conserved across eukaryotes.
Arnone JT, Robbins-Pianka A, Arace JR, Kass-Gergi S, McAlear MA. Arnone JT, et al. Among authors: mcalear ma. BMC Genomics. 2012 Oct 10;13:546. doi: 10.1186/1471-2164-13-546. BMC Genomics. 2012. PMID: 23051624 Free PMC article.
Adjacent gene pairing plays a role in the coordinated expression of ribosome biogenesis genes MPP10 and YJR003C in Saccharomyces cerevisiae.
Arnone JT, McAlear MA. Arnone JT, et al. Among authors: mcalear ma. Eukaryot Cell. 2011 Jan;10(1):43-53. doi: 10.1128/EC.00257-10. Epub 2010 Nov 29. Eukaryot Cell. 2011. PMID: 21115740 Free PMC article.
Monomeric yeast PCNA mutants are defective in interacting with and stimulating the ATPase activity of RFC.
Ionescu CN, Shea KA, Mehra R, Prundeanu L, McAlear MA. Ionescu CN, et al. Among authors: mcalear ma. Biochemistry. 2002 Oct 29;41(43):12975-85. doi: 10.1021/bi026029s. Biochemistry. 2002. PMID: 12390024
The yeast rRNA biosynthesis factor Ebp2p is also required for efficient nuclear division.
Ionescu CN, Origanti S, McAlear MA. Ionescu CN, et al. Among authors: mcalear ma. Yeast. 2004 Oct 30;21(14):1219-32. doi: 10.1002/yea.1177. Yeast. 2004. PMID: 15515129 Free article.
Allele-specific interactions between the yeast RFC1 and RFC5 genes suggest a basis for RFC subunit-subunit interactions.
Beckwith W, McAlear MA. Beckwith W, et al. Among authors: mcalear ma. Mol Gen Genet. 2000 Nov;264(4):378-91. doi: 10.1007/s004380000339. Mol Gen Genet. 2000. PMID: 11129041
EBP2 is a member of the yeast RRB regulon, a transcriptionally coregulated set of genes that are required for ribosome and rRNA biosynthesis.
Wade C, Shea KA, Jensen RV, McAlear MA. Wade C, et al. Among authors: mcalear ma. Mol Cell Biol. 2001 Dec;21(24):8638-50. doi: 10.1128/MCB.21.24.8638-8650.2001. Mol Cell Biol. 2001. PMID: 11713296 Free PMC article.
The budding yeast homolog of the human EBNA1-binding protein 2 (Ebp2p) is an essential nucleolar protein required for pre-rRNA processing.
Huber MD, Dworet JH, Shire K, Frappier L, McAlear MA. Huber MD, et al. Among authors: mcalear ma. J Biol Chem. 2000 Sep 15;275(37):28764-73. doi: 10.1074/jbc.M000594200. J Biol Chem. 2000. PMID: 10849420
Destabilized PCNA trimers suppress defective Rfc1 proteins in vivo and in vitro.
Beckwith WH, Sun Q, Bosso R, Gerik KJ, Burgers PM, McAlear MA. Beckwith WH, et al. Among authors: mcalear ma. Biochemistry. 1998 Mar 17;37(11):3711-22. doi: 10.1021/bi972777j. Biochemistry. 1998. PMID: 9521689
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