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Coming of age: ten years of next-generation sequencing technologies.
Goodwin S, McPherson JD, McCombie WR. Goodwin S, et al. Among authors: mccombie wr. Nat Rev Genet. 2016 May 17;17(6):333-51. doi: 10.1038/nrg.2016.49. Nat Rev Genet. 2016. PMID: 27184599 Review.
Expressed genes, Alu repeats and polymorphisms in cosmids sequenced from chromosome 4p16.3.
McCombie WR, Martin-Gallardo A, Gocayne JD, FitzGerald M, Dubnick M, Kelley JM, Castilla L, Liu LI, Wallace S, Trapp S, et al. McCombie WR, et al. Nat Genet. 1992 Aug;1(5):348-53. doi: 10.1038/ng0892-348. Nat Genet. 1992. PMID: 1338771
Automated DNA sequencing and analysis of 106 kilobases from human chromosome 19q13.3.
Martin-Gallardo A, McCombie WR, Gocayne JD, FitzGerald MG, Wallace S, Lee BM, Lamerdin J, Trapp S, Kelley JM, Liu LI, et al. Martin-Gallardo A, et al. Among authors: mccombie wr. Nat Genet. 1992 Apr;1(1):34-9. doi: 10.1038/ng0492-34. Nat Genet. 1992. PMID: 1301997
Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome.
Goodwin S, Gurtowski J, Ethe-Sayers S, Deshpande P, Schatz MC, McCombie WR. Goodwin S, et al. Among authors: mccombie wr. Genome Res. 2015 Nov;25(11):1750-6. doi: 10.1101/gr.191395.115. Epub 2015 Oct 7. Genome Res. 2015. PMID: 26447147 Free PMC article.
The mouse genome: experimental examination of gene predictions and transcriptional start sites.
Dike S, Balija VS, Nascimento LU, Xuan Z, Ou J, Zutavern T, Palmer LE, Hannon G, Zhang MQ, McCombie WR. Dike S, et al. Among authors: mccombie wr. Genome Res. 2004 Dec;14(12):2424-9. doi: 10.1101/gr.3158304. Genome Res. 2004. PMID: 15574821 Free PMC article.
Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line.
Nattestad M, Goodwin S, Ng K, Baslan T, Sedlazeck FJ, Rescheneder P, Garvin T, Fang H, Gurtowski J, Hutton E, Tseng E, Chin CS, Beck T, Sundaravadanam Y, Kramer M, Antoniou E, McPherson JD, Hicks J, McCombie WR, Schatz MC. Nattestad M, et al. Among authors: mccombie wr. Genome Res. 2018 Aug;28(8):1126-1135. doi: 10.1101/gr.231100.117. Epub 2018 Jun 28. Genome Res. 2018. PMID: 29954844 Free PMC article.
High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing.
Hodges E, Smith AD, Kendall J, Xuan Z, Ravi K, Rooks M, Zhang MQ, Ye K, Bhattacharjee A, Brizuela L, McCombie WR, Wigler M, Hannon GJ, Hicks JB. Hodges E, et al. Among authors: mccombie wr. Genome Res. 2009 Sep;19(9):1593-605. doi: 10.1101/gr.095190.109. Epub 2009 Jul 6. Genome Res. 2009. PMID: 19581485 Free PMC article.
Mapping epigenetic mutations in fission yeast using whole-genome next-generation sequencing.
Irvine DV, Goto DB, Vaughn MW, Nakaseko Y, McCombie WR, Yanagida M, Martienssen R. Irvine DV, et al. Among authors: mccombie wr. Genome Res. 2009 Jun;19(6):1077-83. doi: 10.1101/gr.089318.108. Epub 2009 May 7. Genome Res. 2009. PMID: 19423874 Free PMC article.
Comparing low coverage random shotgun sequence data from Brassica oleracea and Oryza sativa genome sequence for their ability to add to the annotation of Arabidopsis thaliana.
Katari MS, Balija V, Wilson RK, Martienssen RA, McCombie WR. Katari MS, et al. Among authors: mccombie wr. Genome Res. 2005 Apr;15(4):496-504. doi: 10.1101/gr.3239105. Genome Res. 2005. PMID: 15805491 Free PMC article.
GFScan: a gene family search tool at genomic DNA level.
Xuan Z, McCombie WR, Zhang MQ. Xuan Z, et al. Among authors: mccombie wr. Genome Res. 2002 Jul;12(7):1142-9. doi: 10.1101/gr.220102. Genome Res. 2002. PMID: 12097353 Free PMC article.
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