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The PSIPRED protein structure prediction server.
McGuffin LJ, Bryson K, Jones DT. McGuffin LJ, et al. Bioinformatics. 2000 Apr;16(4):404-5. doi: 10.1093/bioinformatics/16.4.404. Bioinformatics. 2000. PMID: 10869041
What are the baselines for protein fold recognition?
McGuffin LJ, Bryson K, Jones DT. McGuffin LJ, et al. Bioinformatics. 2001 Jan;17(1):63-72. doi: 10.1093/bioinformatics/17.1.63. Bioinformatics. 2001. PMID: 11222263
Targeting novel folds for structural genomics.
McGuffin LJ, Jones DT. McGuffin LJ, et al. Proteins. 2002 Jul 1;48(1):44-52. doi: 10.1002/prot.10129. Proteins. 2002. PMID: 12012336
Improvement of the GenTHREADER method for genomic fold recognition.
McGuffin LJ, Jones DT. McGuffin LJ, et al. Bioinformatics. 2003 May 1;19(7):874-81. doi: 10.1093/bioinformatics/btg097. Bioinformatics. 2003. PMID: 12724298
Benchmarking secondary structure prediction for fold recognition.
McGuffin LJ, Jones DT. McGuffin LJ, et al. Proteins. 2003 Aug 1;52(2):166-75. doi: 10.1002/prot.10408. Proteins. 2003. PMID: 12833541
Secondary structure prediction with support vector machines.
Ward JJ, McGuffin LJ, Buxton BF, Jones DT. Ward JJ, et al. Bioinformatics. 2003 Sep 1;19(13):1650-5. doi: 10.1093/bioinformatics/btg223. Bioinformatics. 2003. PMID: 12967961
Assembling novel protein folds from super-secondary structural fragments.
Jones DT, McGuffin LJ. Jones DT, et al. Proteins. 2003;53 Suppl 6:480-5. doi: 10.1002/prot.10542. Proteins. 2003. PMID: 14579336
The Genomic Threading Database: a comprehensive resource for structural annotations of the genomes from key organisms.
McGuffin LJ, Street SA, Bryson K, Sørensen SA, Jones DT. McGuffin LJ, et al. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D196-9. doi: 10.1093/nar/gkh043. Nucleic Acids Res. 2004. PMID: 14681393 Free PMC article.
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