McInerney JO - Search Results

1

New approaches for unravelling reassortment pathways.

Svinti V, Cotton JA, McInerney JO. Svinti V, et al. Among authors: mcinerney jo. BMC Evol Biol. 2013 Jan 1;13:1. doi: 10.1186/1471-2148-13-1. BMC Evol Biol. 2013. PMID: 23279962 Free PMC article.

2

The tree of genomes: an empirical comparison of genome-phylogeny reconstruction methods.

McCann A, Cotton JA, McInerney JO. McCann A, et al. Among authors: mcinerney jo. BMC Evol Biol. 2008 Nov 12;8:312. doi: 10.1186/1471-2148-8-312. BMC Evol Biol. 2008. PMID: 19014489 Free PMC article.

3

Supertrees disentangle the chimerical origin of eukaryotic genomes.

Pisani D, Cotton JA, McInerney JO. Pisani D, et al. Among authors: mcinerney jo. Mol Biol Evol. 2007 Aug;24(8):1752-60. doi: 10.1093/molbev/msm095. Epub 2007 May 15. Mol Biol Evol. 2007. PMID: 17504772

4

The prokaryotic tree of life: past, present... and future?

McInerney JO, Cotton JA, Pisani D. McInerney JO, et al. Trends Ecol Evol. 2008 May;23(5):276-81. doi: 10.1016/j.tree.2008.01.008. Epub 2008 Mar 25. Trends Ecol Evol. 2008. PMID: 18367290 Review.

5

Eukaryotic genes of archaebacterial origin are more important than the more numerous eubacterial genes, irrespective of function.

Cotton JA, McInerney JO. Cotton JA, et al. Among authors: mcinerney jo. Proc Natl Acad Sci U S A. 2010 Oct 5;107(40):17252-5. doi: 10.1073/pnas.1000265107. Epub 2010 Sep 17. Proc Natl Acad Sci U S A. 2010. PMID: 20852068 Free PMC article.

6

The shape of supertrees to come: tree shape related properties of fourteen supertree methods.

Wilkinson M, Cotton JA, Creevey C, Eulenstein O, Harris SR, Lapointe FJ, Levasseur C, McInerney JO, Pisani D, Thorley JL. Wilkinson M, et al. Among authors: mcinerney jo. Syst Biol. 2005 Jun;54(3):419-31. doi: 10.1080/10635150590949832. Syst Biol. 2005. PMID: 16012108

7

Recurring cluster and operon assembly for Phenylacetate degradation genes.

Martin FJ, McInerney JO. Martin FJ, et al. Among authors: mcinerney jo. BMC Evol Biol. 2009 Feb 10;9:36. doi: 10.1186/1471-2148-9-36. BMC Evol Biol. 2009. PMID: 19208251 Free PMC article.

8

Does a tree-like phylogeny only exist at the tips in the prokaryotes?

Creevey CJ, Fitzpatrick DA, Philip GK, Kinsella RJ, O'Connell MJ, Pentony MM, Travers SA, Wilkinson M, McInerney JO. Creevey CJ, et al. Among authors: mcinerney jo. Proc Biol Sci. 2004 Dec 22;271(1557):2551-8. doi: 10.1098/rspb.2004.2864. Proc Biol Sci. 2004. PMID: 15615680 Free PMC article.

9

A method for inferring the rate of evolution of homologous characters that can potentially improve phylogenetic inference, resolve deep divergence and correct systematic biases.

Cummins CA, McInerney JO. Cummins CA, et al. Among authors: mcinerney jo. Syst Biol. 2011 Dec;60(6):833-44. doi: 10.1093/sysbio/syr064. Epub 2011 Jul 29. Syst Biol. 2011. PMID: 21804093

10

DPRml: distributed phylogeny reconstruction by maximum likelihood.

Keane TM, Naughton TJ, Travers SA, McInerney JO, McCormack GP. Keane TM, et al. Among authors: mcinerney jo. Bioinformatics. 2005 Apr 1;21(7):969-74. doi: 10.1093/bioinformatics/bti100. Epub 2004 Oct 28. Bioinformatics. 2005. PMID: 15513992

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