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Multidrug-resistant Escherichia coli bacteremia.
Alhashash F, Weston V, Diggle M, McNally A. Alhashash F, et al. Emerg Infect Dis. 2013 Oct;19(10):1699-701. doi: 10.3201/eid1910.130309. Emerg Infect Dis. 2013. PMID: 24050656 Free PMC article. No abstract available.
Diversification of Colonization Factors in a Multidrug-Resistant Escherichia coli Lineage Evolving under Negative Frequency-Dependent Selection.
McNally A, Kallonen T, Connor C, Abudahab K, Aanensen DM, Horner C, Peacock SJ, Parkhill J, Croucher NJ, Corander J. McNally A, et al. mBio. 2019 Apr 23;10(2):e00644-19. doi: 10.1128/mBio.00644-19. mBio. 2019. PMID: 31015329 Free PMC article.
Escherichia coli is a major cause of bloodstream and urinary tract infections globally. The wide dissemination of multidrug-resistant (MDR) strains of extraintestinal pathogenic E. coli (ExPEC) poses a rapidly increasing public health burden due to narrowed treatmen …
Escherichia coli is a major cause of bloodstream and urinary tract infections globally. The wide dissemination of multidrug-resistant …
The evolutionary path to extraintestinal pathogenic, drug-resistant Escherichia coli is marked by drastic reduction in detectable recombination within the core genome.
McNally A, Cheng L, Harris SR, Corander J. McNally A, et al. Genome Biol Evol. 2013;5(4):699-710. doi: 10.1093/gbe/evt038. Genome Biol Evol. 2013. PMID: 23493634 Free PMC article.
Escherichia coli is a highly diverse group of pathogens ranging from commensal of the intestinal tract, through to intestinal pathogen, and extraintestinal pathogen. ...Our data show that the emergence of a multidrug-resistant, extraintestinal pathogenic lineage of …
Escherichia coli is a highly diverse group of pathogens ranging from commensal of the intestinal tract, through to intestinal pathoge …
Genomic analysis of extra-intestinal pathogenic Escherichia coli urosepsis.
McNally A, Alhashash F, Collins M, Alqasim A, Paszckiewicz K, Weston V, Diggle M. McNally A, et al. Clin Microbiol Infect. 2013 Aug;19(8):E328-34. doi: 10.1111/1469-0691.12202. Epub 2013 Apr 10. Clin Microbiol Infect. 2013. PMID: 23573792
Urosepsis is a bacteraemia infection caused by an organism previously causing an infection in the urinary tract of a patient, a diagnosis which has been classically confirmed by culture of the same species of bacteria from both blood and urine samples. ...Add …
Urosepsis is a bacteraemia infection caused by an organism previously causing an infection in the urinary tract of a patient, …
New Variant of mcr-3 in an Extensively Drug-Resistant Escherichia coli Clinical Isolate Carrying mcr-1 and blaNDM-5.
Liu L, Feng Y, Zhang X, McNally A, Zong Z. Liu L, et al. Antimicrob Agents Chemother. 2017 Nov 22;61(12):e01757-17. doi: 10.1128/AAC.01757-17. Print 2017 Dec. Antimicrob Agents Chemother. 2017. PMID: 28971871 Free PMC article.
A colistin- and carbapenem-resistant Escherichia coli clinical isolate was found to carry two plasmid-borne colistin-resistant genes, mcr-1 and the newly identified mcr-3, and a carbapenemase gene, bla(NDM-5)mcr-3 is a new variant (mcr-3.5) in the isolate and
A colistin- and carbapenem-resistant Escherichia coli clinical isolate was found to carry two plasmid-borne colistin-resistant genes,
Molecular epidemiology of extraintestinal pathogenic Escherichia coli isolates from a regional cohort of elderly patients highlights the prevalence of ST131 strains with increased antimicrobial resistance in both community and hospital care settings.
Croxall G, Hale J, Weston V, Manning G, Cheetham P, Achtman M, McNally A. Croxall G, et al. J Antimicrob Chemother. 2011 Nov;66(11):2501-8. doi: 10.1093/jac/dkr349. Epub 2011 Aug 22. J Antimicrob Chemother. 2011. PMID: 21862477
E. coli ST131 (where ST stands for sequence type) was the predominant ST found in both hospital and community samples, and demonstrated high levels of antibiotic resistance to the test panel, but did not possess a significantly larger array of virulence genes or a s …
E. coli ST131 (where ST stands for sequence type) was the predominant ST found in both hospital and community samples, and demonstrated high …
Phenotypic microarrays suggest Escherichia coli ST131 is not a metabolically distinct lineage of extra-intestinal pathogenic E. coli.
Alqasim A, Emes R, Clark G, Newcombe J, La Ragione R, McNally A. Alqasim A, et al. PLoS One. 2014 Feb 7;9(2):e88374. doi: 10.1371/journal.pone.0088374. eCollection 2014. PLoS One. 2014. PMID: 24516644 Free PMC article.
The emergence of the CTX-M producing clone E. coli ST131 represents a major challenge to public health worldwide. A recent study on the metabolic potential of E. coli isolates demonstrated an association between the E. coli ST131 clone and enhanced utilisation of …
The emergence of the CTX-M producing clone E. coli ST131 represents a major challenge to public health worldwide. A recent stu …
Increase in bacteraemia cases in the East Midlands region of the UK due to MDR Escherichia coli ST73: high levels of genomic and plasmid diversity in causative isolates.
Alhashash F, Wang X, Paszkiewicz K, Diggle M, Zong Z, McNally A. Alhashash F, et al. J Antimicrob Chemother. 2016 Feb;71(2):339-43. doi: 10.1093/jac/dkv365. Epub 2015 Oct 30. J Antimicrob Chemother. 2016. PMID: 26518049
High-resolution SNP typing was used to create a phylogenetic tree. Comparative genomics were also performed using a pangenome approach. ...The isolates also contain a highly diverse plasmid pool that confers MDR via carriage of CTX-M genes. CONCLUSIONS: Our d …
High-resolution SNP typing was used to create a phylogenetic tree. Comparative genomics were also performed using a pangenome …
Directional gene flow and ecological separation in Yersinia enterocolitica.
Reuter S, Corander J, de Been M, Harris S, Cheng L, Hall M, Thomson NR, McNally A. Reuter S, et al. Microb Genom. 2015 Sep 29;1(3):e000030. doi: 10.1099/mgen.0.000030. eCollection 2015 Sep. Microb Genom. 2015. PMID: 28348815 Free PMC article.
Yersinia enterocolitica is a common cause of food-borne gastroenteritis worldwide. Recent work defining the phylogeny of the genus Yersinia subdivided Y. enterocolitica into six distinct phylogroups. ...We tracked gene flow across the species in the core and accessory geno …
Yersinia enterocolitica is a common cause of food-borne gastroenteritis worldwide. Recent work defining the phylogeny of the genus Ye …
'Add, stir and reduce': Yersinia spp. as model bacteria for pathogen evolution.
McNally A, Thomson NR, Reuter S, Wren BW. McNally A, et al. Nat Rev Microbiol. 2016 Mar;14(3):177-90. doi: 10.1038/nrmicro.2015.29. Nat Rev Microbiol. 2016. PMID: 26876035 Review.
Finally, as these traits are also found in the genomes of other species in the Enterobacteriaceae, we suggest that they provide a blueprint for the evolution of enteropathogenic bacteria....
Finally, as these traits are also found in the genomes of other species in the Enterobacteriaceae, we suggest that they provide a blu …
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