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420 results
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Estimating the ancestral recombinations graph (ARG) as compatible networks of SNP patterns.
Parida L, Melé M, Calafell F, Bertranpetit J; Genographic Consortium. Parida L, et al. Among authors: mele m. J Comput Biol. 2008 Nov;15(9):1133-54. doi: 10.1089/cmb.2008.0065. J Comput Biol. 2008. PMID: 18844583
A new method to reconstruct recombination events at a genomic scale.
Melé M, Javed A, Pybus M, Calafell F, Parida L, Bertranpetit J; Genographic Consortium Members. Melé M, et al. PLoS Comput Biol. 2010 Nov 24;6(11):e1001010. doi: 10.1371/journal.pcbi.1001010. PLoS Comput Biol. 2010. PMID: 21124860 Free PMC article.
Minimizing recombinations in consensus networks for phylogeographic studies.
Parida L, Javed A, Melé M, Calafell F, Bertranpetit J; Genographic Consortium. Parida L, et al. Among authors: mele m. BMC Bioinformatics. 2009 Jan 30;10 Suppl 1(Suppl 1):S72. doi: 10.1186/1471-2105-10-S1-S72. BMC Bioinformatics. 2009. PMID: 19208177 Free PMC article.
IRiS: construction of ARG networks at genomic scales.
Javed A, Pybus M, Melé M, Utro F, Bertranpetit J, Calafell F, Parida L. Javed A, et al. Among authors: mele m. Bioinformatics. 2011 Sep 1;27(17):2448-50. doi: 10.1093/bioinformatics/btr423. Epub 2011 Jul 15. Bioinformatics. 2011. PMID: 21765095
Recombination networks as genetic markers in a human variation study of the Old World.
Javed A, Melé M, Pybus M, Zalloua P, Haber M, Comas D, Netea MG, Balanovsky O, Balanovska E, Jin L, Yang Y, Arunkumar G, Pitchappan R, Bertranpetit J, Calafell F, Parida L; Genographic Consortium. Javed A, et al. Among authors: mele m. Hum Genet. 2012 Apr;131(4):601-13. doi: 10.1007/s00439-011-1104-8. Epub 2011 Oct 18. Hum Genet. 2012. PMID: 22006219
Recombination gives a new insight in the effective population size and the history of the old world human populations.
Melé M, Javed A, Pybus M, Zalloua P, Haber M, Comas D, Netea MG, Balanovsky O, Balanovska E, Jin L, Yang Y, Pitchappan RM, Arunkumar G, Parida L, Calafell F, Bertranpetit J; Genographic Consortium. Melé M, et al. Mol Biol Evol. 2012 Jan;29(1):25-30. doi: 10.1093/molbev/msr213. Epub 2011 Sep 1. Mol Biol Evol. 2012. PMID: 21890475
Similarity in recombination rate estimates highly correlates with genetic differentiation in humans.
Laayouni H, Montanucci L, Sikora M, Melé M, Dall'Olio GM, Lorente-Galdos B, McGee KM, Graffelman J, Awadalla P, Bosch E, Comas D, Navarro A, Calafell F, Casals F, Bertranpetit J. Laayouni H, et al. Among authors: mele m. PLoS One. 2011 Mar 28;6(3):e17913. doi: 10.1371/journal.pone.0017913. PLoS One. 2011. PMID: 21464928 Free PMC article.
Human genomics. The human transcriptome across tissues and individuals.
Melé M, Ferreira PG, Reverter F, DeLuca DS, Monlong J, Sammeth M, Young TR, Goldmann JM, Pervouchine DD, Sullivan TJ, Johnson R, Segrè AV, Djebali S, Niarchou A; GTEx Consortium, Wright FA, Lappalainen T, Calvo M, Getz G, Dermitzakis ET, Ardlie KG, Guigó R. Melé M, et al. Science. 2015 May 8;348(6235):660-5. doi: 10.1126/science.aaa0355. Science. 2015. PMID: 25954002 Free PMC article.
Functional Implications of Human-Specific Changes in Great Ape microRNAs.
Gallego A, Melé M, Balcells I, García-Ramallo E, Torruella-Loran I, Fernández-Bellon H, Abelló T, Kondova I, Bontrop R, Hvilsom C, Navarro A, Marquès-Bonet T, Espinosa-Parrilla Y. Gallego A, et al. Among authors: mele m. PLoS One. 2016 Apr 22;11(4):e0154194. doi: 10.1371/journal.pone.0154194. eCollection 2016. PLoS One. 2016. PMID: 27105073 Free PMC article.
Great ape genetic diversity and population history.
Prado-Martinez J, Sudmant PH, Kidd JM, Li H, Kelley JL, Lorente-Galdos B, Veeramah KR, Woerner AE, O'Connor TD, Santpere G, Cagan A, Theunert C, Casals F, Laayouni H, Munch K, Hobolth A, Halager AE, Malig M, Hernandez-Rodriguez J, Hernando-Herraez I, Prüfer K, Pybus M, Johnstone L, Lachmann M, Alkan C, Twigg D, Petit N, Baker C, Hormozdiari F, Fernandez-Callejo M, Dabad M, Wilson ML, Stevison L, Camprubí C, Carvalho T, Ruiz-Herrera A, Vives L, Mele M, Abello T, Kondova I, Bontrop RE, Pusey A, Lankester F, Kiyang JA, Bergl RA, Lonsdorf E, Myers S, Ventura M, Gagneux P, Comas D, Siegismund H, Blanc J, Agueda-Calpena L, Gut M, Fulton L, Tishkoff SA, Mullikin JC, Wilson RK, Gut IG, Gonder MK, Ryder OA, Hahn BH, Navarro A, Akey JM, Bertranpetit J, Reich D, Mailund T, Schierup MH, Hvilsom C, Andrés AM, Wall JD, Bustamante CD, Hammer MF, Eichler EE, Marques-Bonet T. Prado-Martinez J, et al. Among authors: mele m. Nature. 2013 Jul 25;499(7459):471-5. doi: 10.1038/nature12228. Epub 2013 Jul 3. Nature. 2013. PMID: 23823723 Free PMC article.
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