Meyer IM - Search Results

1

Reciprocal regulation of glycine-rich RNA-binding proteins via an interlocked feedback loop coupling alternative splicing to nonsense-mediated decay in Arabidopsis.

Schöning JC, Streitner C, Meyer IM, Gao Y, Staiger D. Schöning JC, et al. Among authors: meyer im. Nucleic Acids Res. 2008 Dec;36(22):6977-87. doi: 10.1093/nar/gkn847. Epub 2008 Nov 4. Nucleic Acids Res. 2008. PMID: 18987006 Free PMC article.

2

Statistical evidence for conserved, local secondary structure in the coding regions of eukaryotic mRNAs and pre-mRNAs.

Meyer IM, Miklós I. Meyer IM, et al. Nucleic Acids Res. 2005 Nov 7;33(19):6338-48. doi: 10.1093/nar/gki923. Print 2005. Nucleic Acids Res. 2005. PMID: 16275783 Free PMC article.

3

Gene structure conservation aids similarity based gene prediction.

Meyer IM, Durbin R. Meyer IM, et al. Nucleic Acids Res. 2004 Feb 4;32(2):776-83. doi: 10.1093/nar/gkh211. Print 2004. Nucleic Acids Res. 2004. PMID: 14764925 Free PMC article.

4

In silico methods for co-transcriptional RNA secondary structure prediction and for investigating alternative RNA structure expression.

Meyer IM. Meyer IM. Methods. 2017 May 1;120:3-16. doi: 10.1016/j.ymeth.2017.04.009. Epub 2017 Apr 20. Methods. 2017. PMID: 28433606 Review.

5

R-CHIE: a web server and R package for visualizing RNA secondary structures.

Lai D, Proctor JR, Zhu JY, Meyer IM. Lai D, et al. Among authors: meyer im. Nucleic Acids Res. 2012 Jul;40(12):e95. doi: 10.1093/nar/gks241. Epub 2012 Mar 19. Nucleic Acids Res. 2012. PMID: 22434875 Free PMC article.

6

A comparative method for finding and folding RNA secondary structures within protein-coding regions.

Pedersen JS, Meyer IM, Forsberg R, Simmonds P, Hein J. Pedersen JS, et al. Among authors: meyer im. Nucleic Acids Res. 2004 Sep 24;32(16):4925-36. doi: 10.1093/nar/gkh839. Print 2004. Nucleic Acids Res. 2004. PMID: 15448187 Free PMC article.

7

Transient RNA structure features are evolutionarily conserved and can be computationally predicted.

Zhu JY, Steif A, Proctor JR, Meyer IM. Zhu JY, et al. Among authors: meyer im. Nucleic Acids Res. 2013 Jul;41(12):6273-85. doi: 10.1093/nar/gkt319. Epub 2013 Apr 26. Nucleic Acids Res. 2013. PMID: 23625966 Free PMC article.

8

COFOLD: an RNA secondary structure prediction method that takes co-transcriptional folding into account.

Proctor JR, Meyer IM. Proctor JR, et al. Among authors: meyer im. Nucleic Acids Res. 2013 May;41(9):e102. doi: 10.1093/nar/gkt174. Epub 2013 Mar 19. Nucleic Acids Res. 2013. PMID: 23511969 Free PMC article.

9

HMMCONVERTER 1.0: a toolbox for hidden Markov models.

Lam TY, Meyer IM. Lam TY, et al. Among authors: meyer im. Nucleic Acids Res. 2009 Nov;37(21):e139. doi: 10.1093/nar/gkp662. Nucleic Acids Res. 2009. PMID: 19740770 Free PMC article.

10

Comparative ab initio prediction of gene structures using pair HMMs.

Meyer IM, Durbin R. Meyer IM, et al. Bioinformatics. 2002 Oct;18(10):1309-18. doi: 10.1093/bioinformatics/18.10.1309. Bioinformatics. 2002. PMID: 12376375

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