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Kinase-specific prediction of protein phosphorylation sites.
Miller ML, Blom N. Miller ML, et al. Methods Mol Biol. 2009;527:299-310, x. doi: 10.1007/978-1-60327-834-8_22. Methods Mol Biol. 2009. PMID: 19241022 Review.
NetPhosBac - a predictor for Ser/Thr phosphorylation sites in bacterial proteins.
Miller ML, Soufi B, Jers C, Blom N, Macek B, Mijakovic I. Miller ML, et al. Proteomics. 2009 Jan;9(1):116-25. doi: 10.1002/pmic.200800285. Proteomics. 2009. PMID: 19053140
Motif decomposition of the phosphotyrosine proteome reveals a new N-terminal binding motif for SHIP2.
Miller ML, Hanke S, Hinsby AM, Friis C, Brunak S, Mann M, Blom N. Miller ML, et al. Mol Cell Proteomics. 2008 Jan;7(1):181-92. doi: 10.1074/mcp.M700241-MCP200. Mol Cell Proteomics. 2008. PMID: 17938406
Linear motif atlas for phosphorylation-dependent signaling.
Miller ML, Jensen LJ, Diella F, Jørgensen C, Tinti M, Li L, Hsiung M, Parker SA, Bordeaux J, Sicheritz-Ponten T, Olhovsky M, Pasculescu A, Alexander J, Knapp S, Blom N, Bork P, Li S, Cesareni G, Pawson T, Turk BE, Yaffe MB, Brunak S, Linding R. Miller ML, et al. Sci Signal. 2008 Sep 2;1(35):ra2. doi: 10.1126/scisignal.1159433. Sci Signal. 2008. PMID: 18765831 Free PMC article.
NetPhosYeast: prediction of protein phosphorylation sites in yeast.
Ingrell CR, Miller ML, Jensen ON, Blom N. Ingrell CR, et al. Among authors: miller ml. Bioinformatics. 2007 Apr 1;23(7):895-7. doi: 10.1093/bioinformatics/btm020. Epub 2007 Feb 5. Bioinformatics. 2007. PMID: 17282998
KinomeXplorer: an integrated platform for kinome biology studies.
Horn H, Schoof EM, Kim J, Robin X, Miller ML, Diella F, Palma A, Cesareni G, Jensen LJ, Linding R. Horn H, et al. Among authors: miller ml. Nat Methods. 2014 Jun;11(6):603-4. doi: 10.1038/nmeth.2968. Nat Methods. 2014. PMID: 24874572 No abstract available.
Meta-analysis of heterogeneous data sources for genome-scale identification of risk genes in complex phenotypes.
Pers TH, Hansen NT, Lage K, Koefoed P, Dworzynski P, Miller ML, Flint TJ, Mellerup E, Dam H, Andreassen OA, Djurovic S, Melle I, Børglum AD, Werge T, Purcell S, Ferreira MA, Kouskoumvekaki I, Workman CT, Hansen T, Mors O, Brunak S. Pers TH, et al. Among authors: miller ml. Genet Epidemiol. 2011 Jul;35(5):318-32. doi: 10.1002/gepi.20580. Epub 2011 Apr 11. Genet Epidemiol. 2011. PMID: 21484861
Use of PROMIS® to screen for depression in children with arthritis.
Yan Y, Rychlik KL, Rosenman MB, Miller ML. Yan Y, et al. Among authors: miller ml. Pediatr Rheumatol Online J. 2020 Nov 23;18(1):92. doi: 10.1186/s12969-020-00482-1. Pediatr Rheumatol Online J. 2020. PMID: 33228749 Free PMC article.
Integrated Multi-Tumor Radio-Genomic Marker of Outcomes in Patients with High Serous Ovarian Carcinoma.
Veeraraghavan H, Vargas HA, Sánchez AJ, Micco M, Mema E, Lakhman Y, Crispin-Ortuzar M, Huang EP, Levine DA, Grisham RN, Abu-Rustum N, Deasy JO, Snyder A, Miller ML, Brenton JD, Sala E. Veeraraghavan H, et al. Among authors: miller ml. Cancers (Basel). 2020 Nov 17;12(11):3403. doi: 10.3390/cancers12113403. Cancers (Basel). 2020. PMID: 33212885 Free PMC article.
The effects of web-prolonged exposure among military personnel and veterans with posttraumatic stress disorder.
McLean CP, Foa EB, Dondanville KA, Haddock CK, Miller ML, Rauch SAM, Yarvis JS, Wright EC, Hall-Clark BN, Fina BA, Litz BT, Mintz J, Young-McCaughan S, Peterson AL. McLean CP, et al. Among authors: miller ml. Psychol Trauma. 2020 Nov 19. doi: 10.1037/tra0000978. Online ahead of print. Psychol Trauma. 2020. PMID: 33211517
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