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Proteome evolution and the metabolic origins of translation and cellular life.
Caetano-Anollés D, Kim KM, Mittenthal JE, Caetano-Anollés G. Caetano-Anollés D, et al. Among authors: mittenthal je. J Mol Evol. 2011 Jan;72(1):14-33. doi: 10.1007/s00239-010-9400-9. Epub 2010 Nov 17. J Mol Evol. 2011. PMID: 21082171
Archaea: the first domain of diversified life.
Caetano-Anollés G, Nasir A, Zhou K, Caetano-Anollés D, Mittenthal JE, Sun FJ, Kim KM. Caetano-Anollés G, et al. Among authors: mittenthal je. Archaea. 2014 Jun 2;2014:590214. doi: 10.1155/2014/590214. eCollection 2014. Archaea. 2014. PMID: 24987307 Free PMC article. Review.
A general framework of persistence strategies for biological systems helps explain domains of life.
Yafremava LS, Wielgos M, Thomas S, Nasir A, Wang M, Mittenthal JE, Caetano-Anollés G. Yafremava LS, et al. Among authors: mittenthal je. Front Genet. 2013 Feb 25;4:16. doi: 10.3389/fgene.2013.00016. eCollection 2013. Front Genet. 2013. PMID: 23443991 Free PMC article.
A calibrated chronology of biochemistry reveals a stem line of descent responsible for planetary biodiversity.
Caetano-Anollés G, Mittenthal JE, Caetano-Anollés D, Kim KM. Caetano-Anollés G, et al. Among authors: mittenthal je. Front Genet. 2014 Sep 11;5:306. doi: 10.3389/fgene.2014.00306. eCollection 2014. Front Genet. 2014. PMID: 25309572 Free PMC article.
The organization of domains in proteins obeys Menzerath-Altmann's law of language.
Shahzad K, Mittenthal JE, Caetano-Anollés G. Shahzad K, et al. Among authors: mittenthal je. BMC Syst Biol. 2015 Aug 11;9:44. doi: 10.1186/s12918-015-0192-9. BMC Syst Biol. 2015. PMID: 26260760 Free PMC article.
A universal molecular clock of protein folds and its power in tracing the early history of aerobic metabolism and planet oxygenation.
Wang M, Jiang YY, Kim KM, Qu G, Ji HF, Mittenthal JE, Zhang HY, Caetano-Anollés G. Wang M, et al. Among authors: mittenthal je. Mol Biol Evol. 2011 Jan;28(1):567-82. doi: 10.1093/molbev/msq232. Epub 2010 Aug 30. Mol Biol Evol. 2011. PMID: 20805191
The origin, evolution and structure of the protein world.
Caetano-Anollés G, Wang M, Caetano-Anollés D, Mittenthal JE. Caetano-Anollés G, et al. Among authors: mittenthal je. Biochem J. 2009 Feb 1;417(3):621-37. doi: 10.1042/BJ20082063. Biochem J. 2009. PMID: 19133840 Review.
The origin and evolution of modern metabolism.
Caetano-Anollés G, Yafremava LS, Gee H, Caetano-Anollés D, Kim HS, Mittenthal JE. Caetano-Anollés G, et al. Among authors: mittenthal je. Int J Biochem Cell Biol. 2009 Feb;41(2):285-97. doi: 10.1016/j.biocel.2008.08.022. Epub 2008 Aug 26. Int J Biochem Cell Biol. 2009. PMID: 18790074 Review.
Origins and evolution of modern biochemistry: insights from genomes and molecular structure.
Caetano-Anolles G, Sun FJ, Wang M, Yafremava LS, Harish A, Kim HS, Knudsen V, Caetano-Anolles D, Mittenthal JE. Caetano-Anolles G, et al. Among authors: mittenthal je. Front Biosci. 2008 May 1;13:5212-40. doi: 10.2741/3077. Front Biosci. 2008. PMID: 18508583 Review.
Reductive evolution of architectural repertoires in proteomes and the birth of the tripartite world.
Wang M, Yafremava LS, Caetano-Anollés D, Mittenthal JE, Caetano-Anollés G. Wang M, et al. Among authors: mittenthal je. Genome Res. 2007 Nov;17(11):1572-85. doi: 10.1101/gr.6454307. Epub 2007 Oct 1. Genome Res. 2007. PMID: 17908824 Free PMC article.
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