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Molecular sensing by the aptamer domain of the FMN riboswitch: a general model for ligand binding by conformational selection.
Vicens Q, Mondragón E, Batey RT. Vicens Q, et al. Among authors: mondragon e. Nucleic Acids Res. 2011 Oct;39(19):8586-98. doi: 10.1093/nar/gkr565. Epub 2011 Jul 10. Nucleic Acids Res. 2011. PMID: 21745821 Free PMC article.
Structure-Activity Relationship of Flavin Analogues That Target the Flavin Mononucleotide Riboswitch.
Vicens Q, Mondragón E, Reyes FE, Coish P, Aristoff P, Berman J, Kaur H, Kells KW, Wickens P, Wilson J, Gadwood RC, Schostarez HJ, Suto RK, Blount KF, Batey RT. Vicens Q, et al. Among authors: mondragon e. ACS Chem Biol. 2018 Oct 19;13(10):2908-2919. doi: 10.1021/acschembio.8b00533. Epub 2018 Sep 20. ACS Chem Biol. 2018. PMID: 30107111 Free PMC article.
Discrimination between closely related cellular metabolites by the SAM-I riboswitch.
Montange RK, Mondragón E, van Tyne D, Garst AD, Ceres P, Batey RT. Montange RK, et al. Among authors: mondragon e. J Mol Biol. 2010 Feb 26;396(3):761-72. doi: 10.1016/j.jmb.2009.12.007. Epub 2009 Dec 16. J Mol Biol. 2010. PMID: 20006621 Free PMC article.
RNA aptamer inhibitors of a restriction endonuclease.
Mondragón E, Maher LJ 3rd. Mondragón E, et al. Nucleic Acids Res. 2015 Sep 3;43(15):7544-55. doi: 10.1093/nar/gkv702. Epub 2015 Jul 15. Nucleic Acids Res. 2015. PMID: 26184872 Free PMC article.
Anti-Transcription Factor RNA Aptamers as Potential Therapeutics.
Mondragón E, Maher LJ 3rd. Mondragón E, et al. Nucleic Acid Ther. 2016 Feb;26(1):29-43. doi: 10.1089/nat.2015.0566. Epub 2015 Oct 28. Nucleic Acid Ther. 2016. PMID: 26509637 Free PMC article. Review.
An ace in the hole..
Mondragon E, Maher LJ 3rd. Mondragon E, et al. Structure. 2012 Aug 8;20(8):1285-6. doi: 10.1016/j.str.2012.07.006. Structure. 2012. PMID: 22884102 No abstract available.
Mimicking the Organic and Inorganic Composition of Anabolic Bone Enhances Human Mesenchymal Stem Cell Osteoinduction and Scaffold Mechanical Properties.
Mondragón E, Cowdin M, Taraballi F, Minardi S, Tasciotti E, Gregory CA, Kaunas R. Mondragón E, et al. Front Bioeng Biotechnol. 2020 Jul 3;8:753. doi: 10.3389/fbioe.2020.00753. eCollection 2020. Front Bioeng Biotechnol. 2020. PMID: 32719790 Free PMC article.
Binding specificities of human RNA-binding proteins toward structured and linear RNA sequences.
Jolma A, Zhang J, Mondragón E, Morgunova E, Kivioja T, Laverty KU, Yin Y, Zhu F, Bourenkov G, Morris Q, Hughes TR, Maher LJ 3rd, Taipale J. Jolma A, et al. Among authors: mondragon e. Genome Res. 2020 Jul;30(7):962-973. doi: 10.1101/gr.258848.119. Epub 2020 Jul 23. Genome Res. 2020. PMID: 32703884 Free PMC article.
Global stability analysis for a model with carriers and non-linear incidence rate.
Cerón Gómez M, Mondragon EI, Molano PL. Cerón Gómez M, et al. Among authors: mondragon ei. J Biol Dyn. 2020 Dec;14(1):409-420. doi: 10.1080/17513758.2020.1772998. J Biol Dyn. 2020. PMID: 32498626
Conditioning of 3D Printed Nanoengineered Ionic-Covalent Entanglement Scaffolds with iP-hMSCs Derived Matrix.
Sears C, Mondragon E, Richards ZI, Sears N, Chimene D, McNeill EP, Gregory CA, Gaharwar AK, Kaunas R. Sears C, et al. Among authors: mondragon e. Adv Healthc Mater. 2020 Aug;9(15):e1901580. doi: 10.1002/adhm.201901580. Epub 2020 Mar 8. Adv Healthc Mater. 2020. PMID: 32147960
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