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Base-pairing requirement for RNA silencing by a bacterial small RNA and acceleration of duplex formation by Hfq.
Kawamoto H, Koide Y, Morita T, Aiba H. Kawamoto H, et al. Among authors: morita t. Mol Microbiol. 2006 Aug;61(4):1013-22. doi: 10.1111/j.1365-2958.2006.05288.x. Epub 2006 Jul 12. Mol Microbiol. 2006. PMID: 16859494
Mechanism and physiological significance of autoregulation of the Escherichia coli hfq gene.
Morita T, Aiba H. Morita T, et al. RNA. 2019 Feb;25(2):264-276. doi: 10.1261/rna.068106.118. Epub 2018 Nov 28. RNA. 2019. PMID: 30487269 Free PMC article.
Role of the terminator hairpin in the biogenesis of functional Hfq-binding sRNAs.
Morita T, Nishino R, Aiba H. Morita T, et al. RNA. 2017 Sep;23(9):1419-1431. doi: 10.1261/rna.060756.117. Epub 2017 Jun 12. RNA. 2017. PMID: 28606943 Free PMC article.
Rho-independent transcription terminators of the genes encoding bacterial Hfq-binding sRNAs possess a set of seven or more T residues at the 3' end, as noted in previous studies. ...Thus, the Rho-independent terminators of sRNA genes possess two common features: a long …
Rho-independent transcription terminators of the genes encoding bacterial Hfq-binding sRNAs possess a set of seven or more T residues …
Insights into transcription termination of Hfq-binding sRNAs of Escherichia coli and characterization of readthrough products.
Morita T, Ueda M, Kubo K, Aiba H. Morita T, et al. RNA. 2015 Aug;21(8):1490-501. doi: 10.1261/rna.051870.115. Epub 2015 Jun 23. RNA. 2015. PMID: 26106215 Free PMC article.
Detection of sRNA-mRNA interactions by electrophoretic mobility shift assay.
Morita T, Maki K, Aiba H. Morita T, et al. Methods Mol Biol. 2012;905:235-44. doi: 10.1007/978-1-61779-949-5_15. Methods Mol Biol. 2012. PMID: 22736008
RNase E action at a distance: degradation of target mRNAs mediated by an Hfq-binding small RNA in bacteria.
Morita T, Aiba H. Morita T, et al. Genes Dev. 2011 Feb 15;25(4):294-8. doi: 10.1101/gad.2030311. Genes Dev. 2011. PMID: 21325130 Free PMC article.
The functional Hfq-binding module of bacterial sRNAs consists of a double or single hairpin preceded by a U-rich sequence and followed by a 3' poly(U) tail.
Ishikawa H, Otaka H, Maki K, Morita T, Aiba H. Ishikawa H, et al. Among authors: morita t. RNA. 2012 May;18(5):1062-74. doi: 10.1261/rna.031575.111. Epub 2012 Mar 27. RNA. 2012. PMID: 22454537 Free PMC article.
Analyses of mRNA destabilization and translational inhibition mediated by Hfq-binding small RNAs.
Morita T, Maki K, Yagi M, Aiba H. Morita T, et al. Methods Enzymol. 2008;447:359-78. doi: 10.1016/S0076-6879(08)02218-0. Methods Enzymol. 2008. PMID: 19161852
PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq action.
Otaka H, Ishikawa H, Morita T, Aiba H. Otaka H, et al. Among authors: morita t. Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13059-64. doi: 10.1073/pnas.1107050108. Epub 2011 Jul 25. Proc Natl Acad Sci U S A. 2011. PMID: 21788484 Free PMC article.
Inhibition of Phagocytic Killing of Escherichia coli in Drosophila Hemocytes by RNA Chaperone Hfq.
Shiratsuchi A, Nitta M, Kuroda A, Komiyama C, Gawasawa M, Shimamoto N, Tuan TQ, Morita T, Aiba H, Nakanishi Y. Shiratsuchi A, et al. Among authors: morita t. J Immunol. 2016 Aug 15;197(4):1298-307. doi: 10.4049/jimmunol.1501953. Epub 2016 Jun 29. J Immunol. 2016. PMID: 27357148
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