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ARTS 2.0: feature updates and expansion of the Antibiotic Resistant Target Seeker for comparative genome mining.
Nucleic Acids Res. 2020 Jul 2;48(W1):W546-W552. doi: 10.1093/nar/gkaa374.
Nucleic Acids Res. 2020.
PMID: 32427317
Free PMC article.
SYN-View: A Phylogeny-Based Synteny Exploration Tool for the Identification of Gene Clusters Linked to Antibiotic Resistance.
Stahlecker J, Mingyar E, Ziemert N, Mungan MD.
Stahlecker J, et al. Among authors: mungan md.
Molecules. 2020 Dec 31;26(1):144. doi: 10.3390/molecules26010144.
Molecules. 2020.
PMID: 33396183
Free PMC article.
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ARTS-DB: a database for antibiotic resistant targets.
Mungan MD, Blin K, Ziemert N.
Mungan MD, et al.
Nucleic Acids Res. 2022 Jan 7;50(D1):D736-D740. doi: 10.1093/nar/gkab940.
Nucleic Acids Res. 2022.
PMID: 34718689
Free PMC article.
Item in Clipboard
Secondary Metabolite Transcriptomic Pipeline (SeMa-Trap), an expression-based exploration tool for increased secondary metabolite production in bacteria.
Mungan MD, Harbig TA, Perez NH, Edenhart S, Stegmann E, Nieselt K, Ziemert N.
Mungan MD, et al.
Nucleic Acids Res. 2022 Jul 5;50(W1):W682-W689. doi: 10.1093/nar/gkac371.
Nucleic Acids Res. 2022.
PMID: 35580059
Free PMC article.
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FunARTS, the Fungal bioActive compound Resistant Target Seeker, an exploration engine for target-directed genome mining in fungi.
Yılmaz TM, Mungan MD, Berasategui A, Ziemert N.
Yılmaz TM, et al. Among authors: mungan md.
Nucleic Acids Res. 2023 Jul 5;51(W1):W191-W197. doi: 10.1093/nar/gkad386.
Nucleic Acids Res. 2023.
PMID: 37207330
Free PMC article.
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Transcriptomic analysis of selenium accumulation in Puccinellia distans (Jacq.) Parl., a boron hyperaccumulator.
Kök AB, Mungan MD, Doğanlar S, Frary A.
Kök AB, et al. Among authors: mungan md.
Chemosphere. 2020 Apr;245:125665. doi: 10.1016/j.chemosphere.2019.125665. Epub 2019 Dec 18.
Chemosphere. 2020.
PMID: 31877459
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