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Accelerating read mapping with FastHASH.
Xin H, Lee D, Hormozdiari F, Yedkar S, Mutlu O, Alkan C. Xin H, et al. Among authors: mutlu o. BMC Genomics. 2013;14 Suppl 1(Suppl 1):S13. doi: 10.1186/1471-2164-14-S1-S13. Epub 2013 Jan 21. BMC Genomics. 2013. PMID: 23369189 Free PMC article.
Fast and accurate mapping of Complete Genomics reads.
Lee D, Hormozdiari F, Xin H, Hach F, Mutlu O, Alkan C. Lee D, et al. Among authors: mutlu o. Methods. 2015 Jun;79-80:3-10. doi: 10.1016/j.ymeth.2014.10.012. Epub 2014 Oct 22. Methods. 2015. PMID: 25461772 Free PMC article.
Optimal seed solver: optimizing seed selection in read mapping.
Xin H, Nahar S, Zhu R, Emmons J, Pekhimenko G, Kingsford C, Alkan C, Mutlu O. Xin H, et al. Among authors: mutlu o. Bioinformatics. 2016 Jun 1;32(11):1632-42. doi: 10.1093/bioinformatics/btv670. Epub 2015 Nov 14. Bioinformatics. 2016. PMID: 26568624 Free PMC article.
104 results