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Universal sample preparation method for proteome analysis.
Wiśniewski JR, Zougman A, Nagaraj N, Mann M. Wiśniewski JR, et al. Nat Methods. 2009 May;6(5):359-62. doi: 10.1038/nmeth.1322. Epub 2009 Apr 19. Nat Methods. 2009. PMID: 19377485
Mass spectrometry-based proteomics using Q Exactive, a high-performance benchtop quadrupole Orbitrap mass spectrometer.
Michalski A, Damoc E, Hauschild JP, Lange O, Wieghaus A, Makarov A, Nagaraj N, Cox J, Mann M, Horning S. Michalski A, et al. Mol Cell Proteomics. 2011 Sep;10(9):M111.011015. doi: 10.1074/mcp.M111.011015. Epub 2011 Jun 3. Mol Cell Proteomics. 2011. PMID: 21642640 Free PMC article.
Large-scale phosphosite quantification in tissues by a spike-in SILAC method.
Monetti M, Nagaraj N, Sharma K, Mann M. Monetti M, et al. Nat Methods. 2011 Jul 10;8(8):655-8. doi: 10.1038/nmeth.1647. Nat Methods. 2011. PMID: 21743459
System-wide perturbation analysis with nearly complete coverage of the yeast proteome by single-shot ultra HPLC runs on a bench top Orbitrap.
Nagaraj N, Kulak NA, Cox J, Neuhauser N, Mayr K, Hoerning O, Vorm O, Mann M. Nagaraj N, et al. Mol Cell Proteomics. 2012 Mar;11(3):M111.013722. doi: 10.1074/mcp.M111.013722. Epub 2011 Oct 20. Mol Cell Proteomics. 2012. PMID: 22021278 Free PMC article.
Deep proteome and transcriptome mapping of a human cancer cell line.
Nagaraj N, Wisniewski JR, Geiger T, Cox J, Kircher M, Kelso J, Pääbo S, Mann M. Nagaraj N, et al. Mol Syst Biol. 2011 Nov 8;7:548. doi: 10.1038/msb.2011.81. Mol Syst Biol. 2011. PMID: 22068331 Free PMC article.
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