Nagaswamy U - Search Results

1

Database of non-canonical base pairs found in known RNA structures.

Nagaswamy U, Voss N, Zhang Z, Fox GE. Nagaswamy U, et al. Nucleic Acids Res. 2000 Jan 1;28(1):375-6. doi: 10.1093/nar/28.1.375. Nucleic Acids Res. 2000. PMID: 10592279 Free PMC article.

2

NCIR: a database of non-canonical interactions in known RNA structures.

Nagaswamy U, Larios-Sanz M, Hury J, Collins S, Zhang Z, Zhao Q, Fox GE. Nagaswamy U, et al. Nucleic Acids Res. 2002 Jan 1;30(1):395-7. doi: 10.1093/nar/30.1.395. Nucleic Acids Res. 2002. PMID: 11752347 Free PMC article.

3

Frequent occurrence of the T-loop RNA folding motif in ribosomal RNAs.

Nagaswamy U, Fox GE. Nagaswamy U, et al. RNA. 2002 Sep;8(9):1112-9. doi: 10.1017/s135583820202006x. RNA. 2002. PMID: 12358430 Free PMC article.

4

RNA ligation and the origin of tRNA.

Nagaswamy U, Fox GE. Nagaswamy U, et al. Orig Life Evol Biosph. 2003 Apr;33(2):199-209. doi: 10.1023/a:1024658727570. Orig Life Evol Biosph. 2003. PMID: 12967267

5

The application of cluster analysis in the intercomparison of loop structures in RNA.

Huang HC, Nagaswamy U, Fox GE. Huang HC, et al. Among authors: nagaswamy u. RNA. 2005 Apr;11(4):412-23. doi: 10.1261/rna.7104605. RNA. 2005. PMID: 15769871 Free PMC article.

6

NMR structure and Mg2+ binding of an RNA segment that underlies the L7/L12 stalk in the E.coli 50S ribosomal subunit.

Zhao Q, Nagaswamy U, Lee H, Xia Y, Huang HC, Gao X, Fox GE. Zhao Q, et al. Among authors: nagaswamy u. Nucleic Acids Res. 2005 Jun 6;33(10):3145-53. doi: 10.1093/nar/gki621. Print 2005. Nucleic Acids Res. 2005. PMID: 15939932 Free PMC article.

7

NMR structure of a ribosomal RNA hairpin containing a conserved CUCAA pentaloop.

Nagaswamy U, Gao X, Martinis SA, Fox GE. Nagaswamy U, et al. Nucleic Acids Res. 2001 Dec 15;29(24):5129-39. doi: 10.1093/nar/29.24.5129. Nucleic Acids Res. 2001. PMID: 11812846 Free PMC article.

8

UNAC tetraloops: to what extent do they mimic GNRA tetraloops?

Zhao Q, Huang HC, Nagaswamy U, Xia Y, Gao X, Fox GE. Zhao Q, et al. Among authors: nagaswamy u. Biopolymers. 2012 Aug;97(8):617-28. doi: 10.1002/bip.22049. Biopolymers. 2012. PMID: 22605553

9

Ribosome origins: the relative age of 23S rRNA Domains.

Hury J, Nagaswamy U, Larios-Sanz M, Fox GE. Hury J, et al. Among authors: nagaswamy u. Orig Life Evol Biosph. 2006 Aug;36(4):421-9. doi: 10.1007/s11084-006-9011-z. Epub 2006 Sep 14. Orig Life Evol Biosph. 2006. PMID: 16972151

10

Integrative annotation of variants from 1092 humans: application to cancer genomics.

Khurana E, Fu Y, Colonna V, Mu XJ, Kang HM, Lappalainen T, Sboner A, Lochovsky L, Chen J, Harmanci A, Das J, Abyzov A, Balasubramanian S, Beal K, Chakravarty D, Challis D, Chen Y, Clarke D, Clarke L, Cunningham F, Evani US, Flicek P, Fragoza R, Garrison E, Gibbs R, Gümüş ZH, Herrero J, Kitabayashi N, Kong Y, Lage K, Liluashvili V, Lipkin SM, MacArthur DG, Marth G, Muzny D, Pers TH, Ritchie GRS, Rosenfeld JA, Sisu C, Wei X, Wilson M, Xue Y, Yu F; 1000 Genomes Project Consortium; Dermitzakis ET, Yu H, Rubin MA, Tyler-Smith C, Gerstein M. Khurana E, et al. Science. 2013 Oct 4;342(6154):1235587. doi: 10.1126/science.1235587. Science. 2013. PMID: 24092746 Free PMC article.

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