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Differential reaction kinetics, cleavage complex formation, and nonamer binding domain dependence dictate the structure-specific and sequence-specific nuclease activity of RAGs.

Naik AK, Raghavan SC. Naik AK, et al. J Mol Biol. 2012 Jan 20;415(3):475-88. doi: 10.1016/j.jmb.2011.11.002. Epub 2011 Nov 12. J Mol Biol. 2012. PMID: 22119487

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P1 nuclease cleavage is dependent on length of the mismatches in DNA.

Naik AK, Raghavan SC. Naik AK, et al. DNA Repair (Amst). 2008 Aug 2;7(8):1384-91. doi: 10.1016/j.dnarep.2008.04.010. Epub 2008 Jun 4. DNA Repair (Amst). 2008. PMID: 18524693

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Cytosines, but not purines, determine recombination activating gene (RAG)-induced breaks on heteroduplex DNA structures: implications for genomic instability.

Naik AK, Lieber MR, Raghavan SC. Naik AK, et al. J Biol Chem. 2010 Mar 5;285(10):7587-97. doi: 10.1074/jbc.M109.089631. Epub 2010 Jan 5. J Biol Chem. 2010. PMID: 20051517 Free PMC article.

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An anti-silencer- and SATB1-dependent chromatin hub regulates Rag1 and Rag2 gene expression during thymocyte development.

Hao B, Naik AK, Watanabe A, Tanaka H, Chen L, Richards HW, Kondo M, Taniuchi I, Kohwi Y, Kohwi-Shigematsu T, Krangel MS. Hao B, et al. Among authors: naik ak. J Exp Med. 2015 May 4;212(5):809-24. doi: 10.1084/jem.20142207. Epub 2015 Apr 6. J Exp Med. 2015. PMID: 25847946 Free PMC article.

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Hierarchical assembly and disassembly of a transcriptionally active RAG locus in CD4⁺CD8⁺ thymocytes.

Naik AK, Byrd AT, Lucander ACK, Krangel MS. Naik AK, et al. J Exp Med. 2019 Jan 7;216(1):231-243. doi: 10.1084/jem.20181402. Epub 2018 Dec 13. J Exp Med. 2019. PMID: 30545902 Free PMC article.

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Specification of Vδ and Vα usage by Tcra/Tcrd locus V gene segment promoters.

Naik AK, Hawwari A, Krangel MS. Naik AK, et al. J Immunol. 2015 Jan 15;194(2):790-4. doi: 10.4049/jimmunol.1402423. Epub 2014 Dec 3. J Immunol. 2015. PMID: 25472997 Free PMC article.

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Potential Risk Factors of Smokeless Tobacco Consumption Among Adolescents in South India.

Kulkarni MM, Kamath VG, Kamath A, Lewis S, Bogdanovica I, Bains M, Cranwell J, Fogarty A, Arora M, Nazar GP, Ballal K, Naik AK, Bhagawath R, Britton J. Kulkarni MM, et al. Among authors: naik ak. Nicotine Tob Res. 2022 Jun 15;24(7):1104-1109. doi: 10.1093/ntr/ntac003. Nicotine Tob Res. 2022. PMID: 35139222 Free PMC article.

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Prospective cohort study of exposure to tobacco imagery in popular films and smoking uptake among children in southern India.

Kulkarni MM, Kamath A, Kamath VG, Lewis S, Bogdanovica I, Bains M, Cranwell J, Fogarty A, Arora M, Nazar GP, Ballal K, Naik AK, Bhagawath R, Britton J. Kulkarni MM, et al. Among authors: naik ak. PLoS One. 2021 Aug 5;16(8):e0253593. doi: 10.1371/journal.pone.0253593. eCollection 2021. PLoS One. 2021. PMID: 34351927 Free PMC article.

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Is performing joint arthroplasty surgery during the COVID-19 pandemic safe?: A retrospective, cohort analysis from a tertiary centre in NCR, Delhi, India.

Meena OP, Kalra P, Shukla A, Naik AK, Iyengar KP, Jain VK. Meena OP, et al. Among authors: naik ak. J Clin Orthop Trauma. 2021 Oct;21:101512. doi: 10.1016/j.jcot.2021.101512. Epub 2021 Jul 22. J Clin Orthop Trauma. 2021. PMID: 34312579 Free PMC article.

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Quantitative probe for in-plane piezoelectric coupling in 2D materials.

Yarajena SS, Biswas R, Raghunathan V, Naik AK. Yarajena SS, et al. Among authors: naik ak. Sci Rep. 2021 Mar 29;11(1):7066. doi: 10.1038/s41598-021-86252-9. Sci Rep. 2021. PMID: 33782418 Free PMC article.

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