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Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment.
Azizi E, Carr AJ, Plitas G, Cornish AE, Konopacki C, Prabhakaran S, Nainys J, Wu K, Kiseliovas V, Setty M, Choi K, Fromme RM, Dao P, McKenney PT, Wasti RC, Kadaveru K, Mazutis L, Rudensky AY, Pe'er D. Azizi E, et al. Among authors: nainys j. Cell. 2018 Aug 23;174(5):1293-1308.e36. doi: 10.1016/j.cell.2018.05.060. Epub 2018 Jun 28. Cell. 2018. PMID: 29961579 Free PMC article.
Recovering Gene Interactions from Single-Cell Data Using Data Diffusion.
van Dijk D, Sharma R, Nainys J, Yim K, Kathail P, Carr AJ, Burdziak C, Moon KR, Chaffer CL, Pattabiraman D, Bierie B, Mazutis L, Wolf G, Krishnaswamy S, Pe'er D. van Dijk D, et al. Among authors: nainys j. Cell. 2018 Jul 26;174(3):716-729.e27. doi: 10.1016/j.cell.2018.05.061. Epub 2018 Jun 28. Cell. 2018. PMID: 29961576 Free PMC article.
Single-cell barcoding and sequencing using droplet microfluidics.
Zilionis R, Nainys J, Veres A, Savova V, Zemmour D, Klein AM, Mazutis L. Zilionis R, et al. Among authors: nainys j. Nat Protoc. 2017 Jan;12(1):44-73. doi: 10.1038/nprot.2016.154. Epub 2016 Dec 8. Nat Protoc. 2017. PMID: 27929523