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261 results
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QSpec: online control and data analysis system for single-cell Raman spectroscopy.
Ren L, Su X, Wang Y, Xu J, Ning K. Ren L, et al. Among authors: ning k. PeerJ. 2014 Jun 26;2:e436. doi: 10.7717/peerj.436. eCollection 2014. PeerJ. 2014. PMID: 25024908 Free PMC article.
Biological ingredient analysis of traditional Chinese medicine preparation based on high-throughput sequencing: the story for Liuwei Dihuang Wan.
Cheng X, Su X, Chen X, Zhao H, Bo C, Xu J, Bai H, Ning K. Cheng X, et al. Among authors: ning k. Sci Rep. 2014 Jun 3;4:5147. doi: 10.1038/srep05147. Sci Rep. 2014. PMID: 24888649 Free PMC article.
Parallel-META 2.0: enhanced metagenomic data analysis with functional annotation, high performance computing and advanced visualization.
Su X, Pan W, Song B, Xu J, Ning K. Su X, et al. Among authors: ning k. PLoS One. 2014 Mar 3;9(3):e89323. doi: 10.1371/journal.pone.0089323. eCollection 2014. PLoS One. 2014. PMID: 24595159 Free PMC article.
Meta-QC-Chain: comprehensive and fast quality control method for metagenomic data.
Zhou Q, Su X, Jing G, Ning K. Zhou Q, et al. Among authors: ning k. Genomics Proteomics Bioinformatics. 2014 Feb;12(1):52-6. doi: 10.1016/j.gpb.2014.01.002. Epub 2014 Feb 4. Genomics Proteomics Bioinformatics. 2014. PMID: 24508279 Free PMC article.
GPU-Meta-Storms: computing the structure similarities among massive amount of microbial community samples using GPU.
Su X, Wang X, Jing G, Ning K. Su X, et al. Among authors: ning k. Bioinformatics. 2014 Apr 1;30(7):1031-3. doi: 10.1093/bioinformatics/btt736. Epub 2013 Dec 19. Bioinformatics. 2014. PMID: 24363375
QC-Chain: fast and holistic quality control method for next-generation sequencing data.
Zhou Q, Su X, Wang A, Xu J, Ning K. Zhou Q, et al. Among authors: ning k. PLoS One. 2013;8(4):e60234. doi: 10.1371/journal.pone.0060234. Epub 2013 Apr 2. PLoS One. 2013. PMID: 23565205 Free PMC article.
Single-cell SNP analyses and interpretations based on RNA-Seq data for colon cancer research.
Chen J, Zhou Q, Wang Y, Ning K. Chen J, et al. Among authors: ning k. Sci Rep. 2016 Sep 28;6:34420. doi: 10.1038/srep34420. Sci Rep. 2016. PMID: 27677461 Free PMC article.
MetaBoot: a machine learning framework of taxonomical biomarker discovery for different microbial communities based on metagenomic data.
Wang X, Su X, Cui X, Ning K. Wang X, et al. Among authors: ning k. PeerJ. 2015 Jul 7;3:e993. doi: 10.7717/peerj.993. eCollection 2015. PeerJ. 2015. PMID: 26213658 Free PMC article.
Parallel-META 3: Comprehensive taxonomical and functional analysis platform for efficient comparison of microbial communities.
Jing G, Sun Z, Wang H, Gong Y, Huang S, Ning K, Xu J, Su X. Jing G, et al. Among authors: ning k. Sci Rep. 2017 Jan 12;7:40371. doi: 10.1038/srep40371. Sci Rep. 2017. PMID: 28079128 Free PMC article.
Rapid comparison and correlation analysis among massive number of microbial community samples based on MDV data model.
Su X, Hu J, Huang S, Ning K. Su X, et al. Among authors: ning k. Sci Rep. 2014 Sep 17;4:6393. doi: 10.1038/srep06393. Sci Rep. 2014. PMID: 25227622 Free PMC article.
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