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1999 1
2002 5
2003 4
2004 11
2005 14
2006 12
2007 15
2008 13
2009 11
2010 5
2011 13
2012 11
2013 7
2014 9
2015 6
2016 10
2017 11
2018 8
2019 7
2020 7
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Whole-Genome Analysis of Clinical Vibrio cholerae O1 in Kolkata, India, and Dhaka, Bangladesh, Reveals Two Lineages of Circulating Strains, Indicating Variation in Genomic Attributes.
Morita D, Morita M, Alam M, Mukhopadhyay AK, Johura FT, Sultana M, Monira S, Ahmed N, Chowdhury G, Dutta S, Ramamurthy T, Samanta P, Takahashi E, Okamoto K, Izumiya H, Ohnishi M. Morita D, et al. mBio. 2020 Nov 10;11(6):e01227-20. doi: 10.1128/mBio.01227-20. mBio. 2020. PMID: 33172996 Free PMC article.
A comparative whole genome analysis of Helicobacter pylori from a human dense South Asian setting.
Qumar S, Nguyen TH, Nahar S, Sarker N, Baker S, Bulach D, Ahmed N, Rahman M. Qumar S, et al. Helicobacter. 2020 Oct 18:e12766. doi: 10.1111/hel.12766. Online ahead of print. Helicobacter. 2020. PMID: 33073485
Design of an inhibitor of Helicobacter pylori cholesteryl-α-glucoside transferase critical for bacterial colonization.
Pal S, Sarker N, Qaria M, Tandon K, Akhter Y, Ahmed N. Pal S, et al. Helicobacter. 2020 Oct;25(5):e12720. doi: 10.1111/hel.12720. Epub 2020 Jul 15. Helicobacter. 2020. PMID: 32668502
Extended-Spectrum Beta-Lactamase-Producing Escherichia coli in Drinking Water Samples From a Forcibly Displaced, Densely Populated Community Setting in Bangladesh.
Mahmud ZH, Kabir MH, Ali S, Moniruzzaman M, Imran KM, Nafiz TN, Islam MS, Hussain A, Hakim SAI, Worth M, Ahmed D, Johnston D, Ahmed N. Mahmud ZH, et al. Front Public Health. 2020 Jun 18;8:228. doi: 10.3389/fpubh.2020.00228. eCollection 2020. Front Public Health. 2020. PMID: 32626677 Free PMC article.
Genome Dynamics of Vibrio cholerae Isolates Linked to Seasonal Outbreaks of Cholera in Dhaka, Bangladesh.
Baddam R, Sarker N, Ahmed D, Mazumder R, Abdullah A, Morshed R, Hussain A, Begum S, Shahrin L, Khan AI, Islam MS, Ahmed T, Alam M, Clemens JD, Ahmed N. Baddam R, et al. mBio. 2020 Feb 11;11(1):e03339-19. doi: 10.1128/mBio.03339-19. mBio. 2020. PMID: 32047137 Free PMC article.
Colistin-resistant Escherichia coli carrying mcr-1 in food, water, hand rinse, and healthy human gut in Bangladesh.
Johura FT, Tasnim J, Barman I, Biswas SR, Jubyda FT, Sultana M, George CM, Camilli A, Seed KD, Ahmed N, Alam M. Johura FT, et al. Gut Pathog. 2020 Jan 27;12:5. doi: 10.1186/s13099-020-0345-2. eCollection 2020. Gut Pathog. 2020. PMID: 32002025 Free PMC article.
Quantification of Airborne Resistant Organisms With Temporal and Spatial Diversity in Bangladesh: Protocol for a Cross-Sectional Study.
Asaduzzaman M, Hossain MI, Saha SR, Islam MR, Ahmed N, Islam MA. Asaduzzaman M, et al. JMIR Res Protoc. 2019 Dec 19;8(12):e14574. doi: 10.2196/14574. JMIR Res Protoc. 2019. PMID: 31855188 Free PMC article.
Prevalence of Shigella boydii in Bangladesh: Isolation and Characterization of a Rare Phage MK-13 That Can Robustly Identify Shigellosis Caused by Shigella boydii Type 1.
Akter M, Brown N, Clokie M, Yeasmin M, Tareq TM, Baddam R, Azad MAK, Ghosh AN, Ahmed N, Talukder KA. Akter M, et al. Front Microbiol. 2019 Nov 7;10:2461. doi: 10.3389/fmicb.2019.02461. eCollection 2019. Front Microbiol. 2019. PMID: 31787934 Free PMC article.
Occurrence of Escherichia coli and faecal coliforms in drinking water at source and household point-of-use in Rohingya camps, Bangladesh.
Mahmud ZH, Islam MS, Imran KM, Hakim SAI, Worth M, Ahmed A, Hossan S, Haider M, Islam MR, Hossain F, Johnston D, Ahmed N. Mahmud ZH, et al. Gut Pathog. 2019 Nov 1;11:52. doi: 10.1186/s13099-019-0333-6. eCollection 2019. Gut Pathog. 2019. PMID: 31695751 Free PMC article.
Mycobacterium tuberculosis DosR regulon gene Rv2004c contributes to streptomycin resistance and intracellular survival.
Doddam SN, Peddireddy V, Yerra P, Sai Arun PP, Qaria MA, Baddam R, Sarker N, Ahmed N. Doddam SN, et al. Int J Med Microbiol. 2019 Dec;309(8):151353. doi: 10.1016/j.ijmm.2019.151353. Epub 2019 Aug 30. Int J Med Microbiol. 2019. PMID: 31521502
Environmental reservoirs of Vibrio cholerae.
Islam MS, Zaman MH, Islam MS, Ahmed N, Clemens JD. Islam MS, et al. Vaccine. 2020 Feb 29;38 Suppl 1:A52-A62. doi: 10.1016/j.vaccine.2019.06.033. Epub 2019 Jul 5. Vaccine. 2020. PMID: 31285087 Free article. Review.
Occurrence and Characterization of Methicillin Resistant Staphylococcus aureus in Processed Raw Foods and Ready-to-Eat Foods in an Urban Setting of a Developing Country.
Islam MA, Parveen S, Rahman M, Huq M, Nabi A, Khan ZUM, Ahmed N, Wagenaar JA. Islam MA, et al. Front Microbiol. 2019 Mar 14;10:503. doi: 10.3389/fmicb.2019.00503. eCollection 2019. Front Microbiol. 2019. PMID: 30923520 Free PMC article.
Genomic and Functional Analysis of Emerging Virulent and Multidrug-Resistant Escherichia coli Lineage Sequence Type 648.
Schaufler K, Semmler T, Wieler LH, Trott DJ, Pitout J, Peirano G, Bonnedahl J, Dolejska M, Literak I, Fuchs S, Ahmed N, Grobbel M, Torres C, McNally A, Pickard D, Ewers C, Croucher NJ, Corander J, Guenther S. Schaufler K, et al. Antimicrob Agents Chemother. 2019 May 24;63(6):e00243-19. doi: 10.1128/AAC.00243-19. Print 2019 Jun. Antimicrob Agents Chemother. 2019. PMID: 30885899 Free PMC article.
Molecular Genetic and Functional Analysis of pks-Harboring, Extra-Intestinal Pathogenic Escherichia coli From India.
Suresh A, Ranjan A, Jadhav S, Hussain A, Shaik S, Alam M, Baddam R, Wieler LH, Ahmed N. Suresh A, et al. Front Microbiol. 2018 Nov 15;9:2631. doi: 10.3389/fmicb.2018.02631. eCollection 2018. Front Microbiol. 2018. PMID: 30498477 Free PMC article.
Roles of Cholesteryl-α-Glucoside Transferase and Cholesteryl Glucosides in Maintenance of Helicobacter pylori Morphology, Cell Wall Integrity, and Resistance to Antibiotics.
Qaria MA, Kumar N, Hussain A, Qumar S, Doddam SN, Sepe LP, Ahmed N. Qaria MA, et al. mBio. 2018 Nov 27;9(6):e01523-18. doi: 10.1128/mBio.01523-18. mBio. 2018. PMID: 30482827 Free PMC article.
ESBL-plasmid carriage in E. coli enhances in vitro bacterial competition fitness and serum resistance in some strains of pandemic sequence types without overall fitness cost.
Ranjan A, Scholz J, Semmler T, Wieler LH, Ewers C, Müller S, Pickard DJ, Schierack P, Tedin K, Ahmed N, Schaufler K, Guenther S. Ranjan A, et al. Gut Pathog. 2018 Jun 15;10:24. doi: 10.1186/s13099-018-0243-z. eCollection 2018. Gut Pathog. 2018. PMID: 29983750 Free PMC article.
Author Correction: Analysis of mutations in pncA reveals non-overlapping patterns among various lineages of Mycobacterium tuberculosis.
Baddam R, Kumar N, Wieler LH, Lankapalli AK, Ahmed N, Peacock SJ, Semmler T. Baddam R, et al. Sci Rep. 2018 May 15;8(1):7892. doi: 10.1038/s41598-018-25809-7. Sci Rep. 2018. PMID: 29760515 Free PMC article.
Inactivation of nuclear factor κB by MIP-based drug combinations augments cell death of breast cancer cells.
Subramaniam M, Liew SK, In L, Awang K, Ahmed N, Nagoor NH. Subramaniam M, et al. Drug Des Devel Ther. 2018 May 1;12:1053-1063. doi: 10.2147/DDDT.S141925. eCollection 2018. Drug Des Devel Ther. 2018. PMID: 29750018 Free PMC article.
Microbiological quality assessment of milk at different stages of the dairy value chain in a developing country setting.
Islam MA, Roy S, Nabi A, Solaiman S, Rahman M, Huq M, Siddiquee NA, Ahmed N. Islam MA, et al. Int J Food Microbiol. 2018 Aug 2;278:11-19. doi: 10.1016/j.ijfoodmicro.2018.04.028. Epub 2018 Apr 17. Int J Food Microbiol. 2018. PMID: 29689333
Analysis of mutations in pncA reveals non-overlapping patterns among various lineages of Mycobacterium tuberculosis.
Baddam R, Kumar N, Wieler LH, Lankapalli AK, Ahmed N, Peacock SJ, Semmler T. Baddam R, et al. Sci Rep. 2018 Mar 15;8(1):4628. doi: 10.1038/s41598-018-22883-9. Sci Rep. 2018. PMID: 29545614 Free PMC article.
AmpliSeq Screening of Genes Encoding the C-Type Lectin Receptors and Their Signaling Components Reveals a Common Variant in MASP1 Associated with Pulmonary Tuberculosis in an Indian Population.
Klassert TE, Goyal S, Stock M, Driesch D, Hussain A, Berrocal-Almanza LC, Myakala R, Sumanlatha G, Valluri V, Ahmed N, Schumann RR, Flores C, Slevogt H. Klassert TE, et al. Front Immunol. 2018 Feb 20;9:242. doi: 10.3389/fimmu.2018.00242. eCollection 2018. Front Immunol. 2018. PMID: 29515573 Free PMC article.
Colistin resistant Escherichia coli carrying mcr-1 in urban sludge samples: Dhaka, Bangladesh.
Islam A, Rahman Z, Monira S, Rahman MA, Camilli A, George CM, Ahmed N, Alam M. Islam A, et al. Gut Pathog. 2017 Dec 20;9:77. doi: 10.1186/s13099-017-0227-4. eCollection 2017. Gut Pathog. 2017. PMID: 29270234 Free PMC article.
Risk of Transmission of Antimicrobial Resistant Escherichia coli from Commercial Broiler and Free-Range Retail Chicken in India.
Hussain A, Shaik S, Ranjan A, Nandanwar N, Tiwari SK, Majid M, Baddam R, Qureshi IA, Semmler T, Wieler LH, Islam MA, Chakravortty D, Ahmed N. Hussain A, et al. Front Microbiol. 2017 Nov 13;8:2120. doi: 10.3389/fmicb.2017.02120. eCollection 2017. Front Microbiol. 2017. PMID: 29180984 Free PMC article.
Existence of a novel qepA variant in quinolone resistant Escherichia coli from aquatic habitats of Bangladesh.
Rahman Z, Islam A, Rashid MU, Johura FT, Monira S, Watanabe H, Ahmed N, Camilli A, Alam M. Rahman Z, et al. Gut Pathog. 2017 Oct 23;9:58. doi: 10.1186/s13099-017-0207-8. eCollection 2017. Gut Pathog. 2017. PMID: 29075330 Free PMC article.
Comparative Genomic Analysis of Globally Dominant ST131 Clone with Other Epidemiologically Successful Extraintestinal Pathogenic Escherichia coli (ExPEC) Lineages.
Shaik S, Ranjan A, Tiwari SK, Hussain A, Nandanwar N, Kumar N, Jadhav S, Semmler T, Baddam R, Islam MA, Alam M, Wieler LH, Watanabe H, Ahmed N. Shaik S, et al. mBio. 2017 Oct 24;8(5):e01596-17. doi: 10.1128/mBio.01596-17. mBio. 2017. PMID: 29066550 Free PMC article.
Comparative Genomics of Escherichia coli Isolated from Skin and Soft Tissue and Other Extraintestinal Infections.
Ranjan A, Shaik S, Nandanwar N, Hussain A, Tiwari SK, Semmler T, Jadhav S, Wieler LH, Alam M, Colwell RR, Ahmed N. Ranjan A, et al. mBio. 2017 Aug 15;8(4):e01070-17. doi: 10.1128/mBio.01070-17. mBio. 2017. PMID: 28811343 Free PMC article.
Mycobacterium tuberculosis DosR Regulon Gene Rv2004c Encodes a Novel Antigen with Pro-inflammatory Functions and Potential Diagnostic Application for Detection of Latent Tuberculosis.
Doddam SN, Peddireddy V, Ahmed N. Doddam SN, et al. Front Immunol. 2017 Jun 24;8:712. doi: 10.3389/fimmu.2017.00712. eCollection 2017. Front Immunol. 2017. PMID: 28694808 Free PMC article.
Impact of Postsynthetic Modification on the Electrical and Magnetic Properties of Materials.
Asha KS, Ahmed N, Nath R, Kuznetsov D, Mandal S. Asha KS, et al. Inorg Chem. 2017 Jul 3;56(13):7316-7319. doi: 10.1021/acs.inorgchem.7b00862. Epub 2017 Jun 19. Inorg Chem. 2017. PMID: 28627874
Development of a potent invigorator of immune responses endowed with both preventive and therapeutic properties.
Talwar GP, Gupta JC, Mustafa AS, Kar HK, Katoch K, Parida SK, Reddi PP, Ahmed N, Saini V, Gupta S. Talwar GP, et al. Biologics. 2017 May 2;11:55-63. doi: 10.2147/BTT.S128308. eCollection 2017. Biologics. 2017. PMID: 28496303 Free PMC article. Review.
Mycobacterial Dormancy Systems and Host Responses in Tuberculosis.
Peddireddy V, Doddam SN, Ahmed N. Peddireddy V, et al. Front Immunol. 2017 Feb 15;8:84. doi: 10.3389/fimmu.2017.00084. eCollection 2017. Front Immunol. 2017. PMID: 28261197 Free PMC article. Review.
Genome Dynamics and Molecular Infection Epidemiology of Multidrug-Resistant Helicobacter pullorum Isolates Obtained from Broiler and Free-Range Chickens in India.
Qumar S, Majid M, Kumar N, Tiwari SK, Semmler T, Devi S, Baddam R, Hussain A, Shaik S, Ahmed N. Qumar S, et al. Appl Environ Microbiol. 2016 Dec 15;83(1):e02305-16. doi: 10.1128/AEM.02305-16. Print 2017 Jan 1. Appl Environ Microbiol. 2016. PMID: 27815276 Free PMC article.
Multipronged regulatory functions of a novel endonuclease (TieA) from Helicobacter pylori.
Devi S, Ansari SA, Tenguria S, Kumar N, Ahmed N. Devi S, et al. Nucleic Acids Res. 2016 Nov 2;44(19):9393-9412. doi: 10.1093/nar/gkw730. Epub 2016 Aug 22. Nucleic Acids Res. 2016. PMID: 27550181 Free PMC article.
A hypervariable genomic island identified in clinical and environmental Mycobacterium avium subsp. hominissuis isolates from Germany.
Sanchini A, Semmler T, Mao L, Kumar N, Dematheis F, Tandon K, Peddireddy V, Ahmed N, Lewin A. Sanchini A, et al. Int J Med Microbiol. 2016 Nov;306(7):495-503. doi: 10.1016/j.ijmm.2016.07.001. Epub 2016 Jul 18. Int J Med Microbiol. 2016. PMID: 27481640
Molecular Epidemiology and Genome Dynamics of New Delhi Metallo-β-Lactamase-Producing Extraintestinal Pathogenic Escherichia coli Strains from India.
Ranjan A, Shaik S, Mondal A, Nandanwar N, Hussain A, Semmler T, Kumar N, Tiwari SK, Jadhav S, Wieler LH, Ahmed N. Ranjan A, et al. Antimicrob Agents Chemother. 2016 Oct 21;60(11):6795-6805. doi: 10.1128/AAC.01345-16. Print 2016 Nov. Antimicrob Agents Chemother. 2016. PMID: 27600040 Free PMC article.
S100A12 is up-regulated in pulmonary tuberculosis and predicts the extent of alveolar infiltration on chest radiography: an observational study.
Berrocal-Almanza LC, Goyal S, Hussain A, Klassert TE, Driesch D, Grozdanovic Z, Sumanlatha G, Ahmed N, Valluri V, Conrad ML, Dittrich N, Schumann RR, Lala B, Slevogt H. Berrocal-Almanza LC, et al. Sci Rep. 2016 Aug 19;6:31798. doi: 10.1038/srep31798. Sci Rep. 2016. PMID: 27539060 Free PMC article. Clinical Trial.
What constitutes an Arabian Helicobacter pylori? Lessons from comparative genomics.
Kumar N, Albert MJ, Al Abkal H, Siddique I, Ahmed N. Kumar N, et al. Helicobacter. 2017 Feb;22(1). doi: 10.1111/hel.12323. Epub 2016 Jun 9. Helicobacter. 2017. PMID: 27277215
Contig-Layout-Authenticator (CLA): A Combinatorial Approach to Ordering and Scaffolding of Bacterial Contigs for Comparative Genomics and Molecular Epidemiology.
Shaik S, Kumar N, Lankapalli AK, Tiwari SK, Baddam R, Ahmed N. Shaik S, et al. PLoS One. 2016 Jun 1;11(6):e0155459. doi: 10.1371/journal.pone.0155459. eCollection 2016. PLoS One. 2016. PMID: 27248146 Free PMC article.
A putative nitroreductase from the DosR regulon of Mycobacterium tuberculosis induces pro-inflammatory cytokine expression via TLR2 signaling pathway.
Peddireddy V, Doddam SN, Qureshi IA, Yerra P, Ahmed N. Peddireddy V, et al. Sci Rep. 2016 Apr 20;6:24535. doi: 10.1038/srep24535. Sci Rep. 2016. PMID: 27094446 Free PMC article.
Cytotoxic and apoptotic effects of heat killed Mycobacterium indicus pranii (MIP) on various human cancer cell lines.
Subramaniam M, In LL, Kumar A, Ahmed N, Nagoor NH. Subramaniam M, et al. Sci Rep. 2016 Jan 28;6:19833. doi: 10.1038/srep19833. Sci Rep. 2016. PMID: 26817684 Free PMC article.
Clonal spread and interspecies transmission of clinically relevant ESBL-producing Escherichia coli of ST410--another successful pandemic clone?
Schaufler K, Semmler T, Wieler LH, Wöhrmann M, Baddam R, Ahmed N, Müller K, Kola A, Fruth A, Ewers C, Guenther S. Schaufler K, et al. FEMS Microbiol Ecol. 2016 Jan;92(1):fiv155. doi: 10.1093/femsec/fiv155. Epub 2015 Dec 9. FEMS Microbiol Ecol. 2016. PMID: 26656065
Induction of Mincle by Helicobacter pylori and consequent anti-inflammatory signaling denote a bacterial survival strategy.
Devi S, Rajakumara E, Ahmed N. Devi S, et al. Sci Rep. 2015 Oct 12;5:15049. doi: 10.1038/srep15049. Sci Rep. 2015. PMID: 26456705 Free PMC article.
Acetylated Rhamnogalacturonans from Immature Fruits of Abelmoschus esculentus Inhibit the Adhesion of Helicobacter pylori to Human Gastric Cells by Interaction with Outer Membrane Proteins.
Thöle C, Brandt S, Ahmed N, Hensel A. Thöle C, et al. Molecules. 2015 Sep 15;20(9):16770-87. doi: 10.3390/molecules200916770. Molecules. 2015. PMID: 26389872 Free PMC article.
A Novel Reading Scheme for Assessing the Extent of Radiographic Abnormalities and Its Association with Disease Severity in Sputum Smear-Positive Tuberculosis: An Observational Study in Hyderabad/India.
Grozdanovic Z, Berrocal Almanza LC, Goyal S, Hussain A, Klassert TE, Driesch D, Tokaryeva V, Löschmann YY, Sumanlatha G, Ahmed N, Valluri V, Schumann RR, Lala B, Slevogt H. Grozdanovic Z, et al. PLoS One. 2015 Sep 18;10(9):e0138070. doi: 10.1371/journal.pone.0138070. eCollection 2015. PLoS One. 2015. PMID: 26381644 Free PMC article.
Genomic and Functional Portrait of a Highly Virulent, CTX-M-15-Producing H30-Rx Subclone of Escherichia coli Sequence Type 131.
Ranjan A, Shaik S, Hussain A, Nandanwar N, Semmler T, Jadhav S, Wieler LH, Ahmed N. Ranjan A, et al. Antimicrob Agents Chemother. 2015 Oct;59(10):6087-95. doi: 10.1128/AAC.01447-15. Epub 2015 Jul 20. Antimicrob Agents Chemother. 2015. PMID: 26195517 Free PMC article.
Genome dynamics and evolution of Salmonella Typhi strains from the typhoid-endemic zones.
Baddam R, Kumar N, Shaik S, Lankapalli AK, Ahmed N. Baddam R, et al. Sci Rep. 2014 Dec 12;4:7457. doi: 10.1038/srep07457. Sci Rep. 2014. PMID: 25504040 Free PMC article.
Comparative genomic analysis of Helicobacter pylori from Malaysia identifies three distinct lineages suggestive of differential evolution.
Kumar N, Mariappan V, Baddam R, Lankapalli AK, Shaik S, Goh KL, Loke MF, Perkins T, Benghezal M, Hasnain SE, Vadivelu J, Marshall BJ, Ahmed N. Kumar N, et al. Nucleic Acids Res. 2015 Jan;43(1):324-35. doi: 10.1093/nar/gku1271. Epub 2014 Dec 1. Nucleic Acids Res. 2015. PMID: 25452339 Free PMC article.
Genotypic and phenotypic profiles of Escherichia coli isolates belonging to clinical sequence type 131 (ST131), clinical non-ST131, and fecal non-ST131 lineages from India.
Hussain A, Ranjan A, Nandanwar N, Babbar A, Jadhav S, Ahmed N. Hussain A, et al. Antimicrob Agents Chemother. 2014 Dec;58(12):7240-9. doi: 10.1128/AAC.03320-14. Epub 2014 Sep 22. Antimicrob Agents Chemother. 2014. PMID: 25246402 Free PMC article.
Helicobacter pylori cell translocating kinase (CtkA/JHP0940) is pro-apoptotic in mouse macrophages and acts as auto-phosphorylating tyrosine kinase.
Tenguria S, Ansari SA, Khan N, Ranjan A, Devi S, Tegtmeyer N, Lind J, Backert S, Ahmed N. Tenguria S, et al. Int J Med Microbiol. 2014 Nov;304(8):1066-76. doi: 10.1016/j.ijmm.2014.07.017. Epub 2014 Aug 6. Int J Med Microbiol. 2014. PMID: 25172221
Extraintestinal pathogenic Escherichia coli (ExPEC) of human and avian origin belonging to sequence type complex 95 (STC95) portray indistinguishable virulence features.
Nandanwar N, Janssen T, Kühl M, Ahmed N, Ewers C, Wieler LH. Nandanwar N, et al. Int J Med Microbiol. 2014 Oct;304(7):835-42. doi: 10.1016/j.ijmm.2014.06.009. Epub 2014 Jun 27. Int J Med Microbiol. 2014. PMID: 25037925
Mycobacterium avium subsp. paratuberculosis is not discerned in diabetes mellitus patients in Hyderabad, India.
Rani PS, Doddam SN, Agrawal S, Hasnain SE, Sechi LA, Kumar A, Ahmed N. Rani PS, et al. Int J Med Microbiol. 2014 Jul;304(5-6):620-5. doi: 10.1016/j.ijmm.2014.04.010. Epub 2014 May 5. Int J Med Microbiol. 2014. PMID: 24863528
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