Nobuta K - Search Results

1

Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends.

German MA, Pillay M, Jeong DH, Hetawal A, Luo S, Janardhanan P, Kannan V, Rymarquis LA, Nobuta K, German R, De Paoli E, Lu C, Schroth G, Meyers BC, Green PJ. German MA, et al. Among authors: nobuta k. Nat Biotechnol. 2008 Aug;26(8):941-6. doi: 10.1038/nbt1417. Epub 2008 Jun 9. Nat Biotechnol. 2008. PMID: 18542052

2

An expression atlas of rice mRNAs and small RNAs.

Nobuta K, Venu RC, Lu C, Beló A, Vemaraju K, Kulkarni K, Wang W, Pillay M, Green PJ, Wang GL, Meyers BC. Nobuta K, et al. Nat Biotechnol. 2007 Apr;25(4):473-7. doi: 10.1038/nbt1291. Epub 2007 Mar 11. Nat Biotechnol. 2007. PMID: 17351617

3

Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs).

Lu C, Jeong DH, Kulkarni K, Pillay M, Nobuta K, German R, Thatcher SR, Maher C, Zhang L, Ware D, Liu B, Cao X, Meyers BC, Green PJ. Lu C, et al. Among authors: nobuta k. Proc Natl Acad Sci U S A. 2008 Mar 25;105(12):4951-6. doi: 10.1073/pnas.0708743105. Epub 2008 Mar 19. Proc Natl Acad Sci U S A. 2008. PMID: 18353984 Free PMC article.

4

Distinct size distribution of endogeneous siRNAs in maize: Evidence from deep sequencing in the mop1-1 mutant.

Nobuta K, Lu C, Shrivastava R, Pillay M, De Paoli E, Accerbi M, Arteaga-Vazquez M, Sidorenko L, Jeong DH, Yen Y, Green PJ, Chandler VL, Meyers BC. Nobuta K, et al. Proc Natl Acad Sci U S A. 2008 Sep 30;105(39):14958-63. doi: 10.1073/pnas.0808066105. Epub 2008 Sep 24. Proc Natl Acad Sci U S A. 2008. PMID: 18815367 Free PMC article.

5

Plant MPSS databases: signature-based transcriptional resources for analyses of mRNA and small RNA.

Nakano M, Nobuta K, Vemaraju K, Tej SS, Skogen JW, Meyers BC. Nakano M, et al. Among authors: nobuta k. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D731-5. doi: 10.1093/nar/gkj077. Nucleic Acids Res. 2006. PMID: 16381968 Free PMC article.

6

Methods for analysis of gene expression in plants using MPSS.

Nobuta K, Vemaraju K, Meyers BC. Nobuta K, et al. Methods Mol Biol. 2007;406:387-408. doi: 10.1007/978-1-59745-535-0_19. Methods Mol Biol. 2007. PMID: 18287704

7

Bioinformatics analysis of small RNAs in plants using next generation sequencing technologies.

Nobuta K, McCormick K, Nakano M, Meyers BC. Nobuta K, et al. Methods Mol Biol. 2010;592:89-106. doi: 10.1007/978-1-60327-005-2_7. Methods Mol Biol. 2010. PMID: 19802591

8

Identification of candidate genes associated with positive and negative heterosis in rice.

Venu RC, Ma J, Jia Y, Liu G, Jia MH, Nobuta K, Sreerekha MV, Moldenhauer K, McClung AM, Meyers BC, Wang GL. Venu RC, et al. Among authors: nobuta k. PLoS One. 2014 Apr 17;9(4):e95178. doi: 10.1371/journal.pone.0095178. eCollection 2014. PLoS One. 2014. PMID: 24743656 Free PMC article.

9

RNA-mediated trans-communication can establish paramutation at the b1 locus in maize.

Arteaga-Vazquez M, Sidorenko L, Rabanal FA, Shrivistava R, Nobuta K, Green PJ, Meyers BC, Chandler VL. Arteaga-Vazquez M, et al. Among authors: nobuta k. Proc Natl Acad Sci U S A. 2010 Jul 20;107(29):12986-91. doi: 10.1073/pnas.1007972107. Epub 2010 Jun 29. Proc Natl Acad Sci U S A. 2010. PMID: 20616013 Free PMC article.

10

Comparative expression profiling in grape (Vitis vinifera) berries derived from frequency analysis of ESTs and MPSS signatures.

Iandolino A, Nobuta K, da Silva FG, Cook DR, Meyers BC. Iandolino A, et al. Among authors: nobuta k. BMC Plant Biol. 2008 May 12;8:53. doi: 10.1186/1471-2229-8-53. BMC Plant Biol. 2008. PMID: 18474095 Free PMC article.

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