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Comparative genomics and evolution of regulons of the LacI-family transcription factors.
Ravcheev DA, Khoroshkin MS, Laikova ON, Tsoy OV, Sernova NV, Petrova SA, Rakhmaninova AB, Novichkov PS, Gelfand MS, Rodionov DA. Ravcheev DA, et al. Among authors: Novichkov PS. Front Microbiol. 2014 Jun 11;5:294. doi: 10.3389/fmicb.2014.00294. eCollection 2014. Front Microbiol. 2014. PMID: 24966856 Free PMC article.
New family of tungstate-responsive transcriptional regulators in sulfate-reducing bacteria.
Kazakov AE, Rajeev L, Luning EG, Zane GM, Siddartha K, Rodionov DA, Dubchak I, Arkin AP, Wall JD, Mukhopadhyay A, Novichkov PS. Kazakov AE, et al. Among authors: Novichkov PS. J Bacteriol. 2013 Oct;195(19):4466-75. doi: 10.1128/JB.00679-13. Epub 2013 Aug 2. J Bacteriol. 2013. PMID: 23913324 Free PMC article.
RegPrecise web services interface: programmatic access to the transcriptional regulatory interactions in bacteria reconstructed by comparative genomics.
Novichkov PS, Brettin TS, Novichkova ES, Dehal PS, Arkin AP, Dubchak I, Rodionov DA. Novichkov PS, et al. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W604-8. doi: 10.1093/nar/gks562. Epub 2012 Jun 14. Nucleic Acids Res. 2012. PMID: 22700702 Free PMC article.
Inference of the transcriptional regulatory network in Staphylococcus aureus by integration of experimental and genomics-based evidence.
Ravcheev DA, Best AA, Tintle N, Dejongh M, Osterman AL, Novichkov PS, Rodionov DA. Ravcheev DA, et al. Among authors: Novichkov PS. J Bacteriol. 2011 Jul;193(13):3228-40. doi: 10.1128/JB.00350-11. Epub 2011 Apr 29. J Bacteriol. 2011. PMID: 21531804 Free PMC article.
MicrobesOnline: an integrated portal for comparative and functional genomics.
Dehal PS, Joachimiak MP, Price MN, Bates JT, Baumohl JK, Chivian D, Friedland GD, Huang KH, Keller K, Novichkov PS, Dubchak IL, Alm EJ, Arkin AP. Dehal PS, et al. Among authors: Novichkov PS. Nucleic Acids Res. 2010 Jan;38(Database issue):D396-400. doi: 10.1093/nar/gkp919. Epub 2009 Nov 11. Nucleic Acids Res. 2010. PMID: 19906701 Free PMC article.
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