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Detecting remotely related proteins by their interactions and sequence similarity.
Espadaler J, Aragüés R, Eswar N, Marti-Renom MA, Querol E, Avilés FX, Sali A, Oliva B. Espadaler J, et al. Among authors: oliva b. Proc Natl Acad Sci U S A. 2005 May 17;102(20):7151-6. doi: 10.1073/pnas.0500831102. Epub 2005 May 9. Proc Natl Acad Sci U S A. 2005. PMID: 15883372 Free PMC article.
Protein similarities beyond disulphide bridge topology.
Mas JM, Aloy P, Martí-Renom MA, Oliva B, Blanco-Aparicio C, Molina MA, de Llorens R, Querol E, Avilés FX. Mas JM, et al. Among authors: oliva b. J Mol Biol. 1998 Dec 4;284(3):541-8. doi: 10.1006/jmbi.1998.2194. J Mol Biol. 1998. PMID: 9826496
Effect of the reaction field electrostatic term on the molecular dynamics simulation of the activation domain of procarboxypeptidase B.
Gargallo R, Oliva B, Querol E, Avilés FX. Gargallo R, et al. Among authors: oliva b. Protein Eng. 2000 Jan;13(1):21-6. doi: 10.1093/protein/13.1.21. Protein Eng. 2000. PMID: 10679526
Molecular dynamics simulations of the activation domain of porcine procarboxypeptidase B (ADBp) were performed in order to examine the effects of the inclusion of a reaction field (RF) term into the calculation of electrostatics forces for highly charged proteins. ...Compa …
Molecular dynamics simulations of the activation domain of porcine procarboxypeptidase B (ADBp) were performed in order to examine th …
288 results