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In-gel digestion for mass spectrometric characterization of proteins and proteomes.
Shevchenko A, Tomas H, Havlis J, Olsen JV, Mann M. Shevchenko A, et al. Among authors: olsen jv. Nat Protoc. 2006;1(6):2856-60. doi: 10.1038/nprot.2006.468. Nat Protoc. 2006. PMID: 17406544
Investigation of protein-tyrosine phosphatase 1B function by quantitative proteomics.
Mertins P, Eberl HC, Renkawitz J, Olsen JV, Tremblay ML, Mann M, Ullrich A, Daub H. Mertins P, et al. Among authors: olsen jv. Mol Cell Proteomics. 2008 Sep;7(9):1763-77. doi: 10.1074/mcp.M800196-MCP200. Epub 2008 May 31. Mol Cell Proteomics. 2008. PMID: 18515860 Free PMC article.
Top-down protein sequencing and MS3 on a hybrid linear quadrupole ion trap-orbitrap mass spectrometer.
Macek B, Waanders LF, Olsen JV, Mann M. Macek B, et al. Among authors: olsen jv. Mol Cell Proteomics. 2006 May;5(5):949-58. doi: 10.1074/mcp.T500042-MCP200. Epub 2006 Feb 13. Mol Cell Proteomics. 2006. PMID: 16478717
Andromeda: a peptide search engine integrated into the MaxQuant environment.
Cox J, Neuhauser N, Michalski A, Scheltema RA, Olsen JV, Mann M. Cox J, et al. Among authors: olsen jv. J Proteome Res. 2011 Apr 1;10(4):1794-805. doi: 10.1021/pr101065j. Epub 2011 Feb 22. J Proteome Res. 2011. PMID: 21254760
Yeast expression proteomics by high-resolution mass spectrometry.
Walther TC, Olsen JV, Mann M. Walther TC, et al. Among authors: olsen jv. Methods Enzymol. 2010;470:259-80. doi: 10.1016/S0076-6879(10)70011-2. Epub 2010 Mar 1. Methods Enzymol. 2010. PMID: 20946814
Feasibility of large-scale phosphoproteomics with higher energy collisional dissociation fragmentation.
Nagaraj N, D'Souza RC, Cox J, Olsen JV, Mann M. Nagaraj N, et al. Among authors: olsen jv. J Proteome Res. 2010 Dec 3;9(12):6786-94. doi: 10.1021/pr100637q. Epub 2010 Oct 26. J Proteome Res. 2010. PMID: 20873877
Quantitative interaction proteomics and genome-wide profiling of epigenetic histone marks and their readers.
Vermeulen M, Eberl HC, Matarese F, Marks H, Denissov S, Butter F, Lee KK, Olsen JV, Hyman AA, Stunnenberg HG, Mann M. Vermeulen M, et al. Among authors: olsen jv. Cell. 2010 Sep 17;142(6):967-80. doi: 10.1016/j.cell.2010.08.020. Cell. 2010. PMID: 20850016
Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis.
Olsen JV, Vermeulen M, Santamaria A, Kumar C, Miller ML, Jensen LJ, Gnad F, Cox J, Jensen TS, Nigg EA, Brunak S, Mann M. Olsen JV, et al. Sci Signal. 2010 Jan 12;3(104):ra3. doi: 10.1126/scisignal.2000475. Sci Signal. 2010. PMID: 20068231
Proteomics strategy for quantitative protein interaction profiling in cell extracts.
Sharma K, Weber C, Bairlein M, Greff Z, Kéri G, Cox J, Olsen JV, Daub H. Sharma K, et al. Among authors: olsen jv. Nat Methods. 2009 Oct;6(10):741-4. doi: 10.1038/nmeth.1373. Epub 2009 Sep 13. Nat Methods. 2009. PMID: 19749761
Lysine acetylation targets protein complexes and co-regulates major cellular functions.
Choudhary C, Kumar C, Gnad F, Nielsen ML, Rehman M, Walther TC, Olsen JV, Mann M. Choudhary C, et al. Among authors: olsen jv. Science. 2009 Aug 14;325(5942):834-40. doi: 10.1126/science.1175371. Epub 2009 Jul 16. Science. 2009. PMID: 19608861
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