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72 results
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Bioinformatics for cancer immunotherapy target discovery.
Olsen LR, Campos B, Barnkob MS, Winther O, Brusic V, Andersen MH. Olsen LR, et al. Cancer Immunol Immunother. 2014 Dec;63(12):1235-49. doi: 10.1007/s00262-014-1627-7. Epub 2014 Oct 26. Cancer Immunol Immunother. 2014. PMID: 25344903 Review.
FluKB: A Knowledge-Based System for Influenza Vaccine Target Discovery and Analysis of the Immunological Properties of Influenza Viruses.
Simon C, Kudahl UJ, Sun J, Olsen LR, Zhang GL, Reinherz EL, Brusic V. Simon C, et al. Among authors: olsen lr. J Immunol Res. 2015;2015:380975. doi: 10.1155/2015/380975. Epub 2015 Oct 4. J Immunol Res. 2015. PMID: 26504853 Free PMC article.
TANTIGEN: a comprehensive database of tumor T cell antigens.
Olsen LR, Tongchusak S, Lin H, Reinherz EL, Brusic V, Zhang GL. Olsen LR, et al. Cancer Immunol Immunother. 2017 Jun;66(6):731-735. doi: 10.1007/s00262-017-1978-y. Epub 2017 Mar 9. Cancer Immunol Immunother. 2017. PMID: 28280852
Transcriptional changes induced by bevacizumab combination therapy in responding and non-responding recurrent glioblastoma patients.
Urup T, Staunstrup LM, Michaelsen SR, Vitting-Seerup K, Bennedbæk M, Toft A, Olsen LR, Jønson L, Issazadeh-Navikas S, Broholm H, Hamerlik P, Poulsen HS, Lassen U. Urup T, et al. Among authors: olsen lr. BMC Cancer. 2017 Apr 18;17(1):278. doi: 10.1186/s12885-017-3251-3. BMC Cancer. 2017. PMID: 28420326 Free PMC article.
Computational Methods for Identification of T Cell Neoepitopes in Tumors.
Jurtz VI, Olsen LR. Jurtz VI, et al. Among authors: olsen lr. Methods Mol Biol. 2019;1878:157-172. doi: 10.1007/978-1-4939-8868-6_9. Methods Mol Biol. 2019. PMID: 30378075
BlockLogo: visualization of peptide and sequence motif conservation.
Olsen LR, Kudahl UJ, Simon C, Sun J, Schönbach C, Reinherz EL, Zhang GL, Brusic V. Olsen LR, et al. J Immunol Methods. 2013 Dec 31;400-401:37-44. doi: 10.1016/j.jim.2013.08.014. Epub 2013 Aug 31. J Immunol Methods. 2013. PMID: 24001880 Free PMC article.
Angiotensinogen and HLA class II predict bevacizumab response in recurrent glioblastoma patients.
Urup T, Michaelsen SR, Olsen LR, Toft A, Christensen IJ, Grunnet K, Winther O, Broholm H, Kosteljanetz M, Issazadeh-Navikas S, Poulsen HS, Lassen U. Urup T, et al. Among authors: olsen lr. Mol Oncol. 2016 Oct;10(8):1160-8. doi: 10.1016/j.molonc.2016.05.005. Epub 2016 May 26. Mol Oncol. 2016. PMID: 27262894 Free PMC article.
Conservation analysis of dengue virus T-cell epitope-based vaccine candidates using Peptide block entropy.
Olsen LR, Zhang GL, Keskin DB, Reinherz EL, Brusic V. Olsen LR, et al. Front Immunol. 2011 Dec 20;2:69. doi: 10.3389/fimmu.2011.00069. eCollection 2011. Front Immunol. 2011. PMID: 22566858 Free PMC article.
FLAVIdB: A data mining system for knowledge discovery in flaviviruses with direct applications in immunology and vaccinology.
Olsen LR, Zhang GL, Reinherz EL, Brusic V. Olsen LR, et al. Immunome Res. 2011;7(3):2. Immunome Res. 2011. PMID: 25544857 Free PMC article.
Software-supported USER cloning strategies for site-directed mutagenesis and DNA assembly.
Genee HJ, Bonde MT, Bagger FO, Jespersen JB, Sommer MO, Wernersson R, Olsen LR. Genee HJ, et al. Among authors: olsen lr. ACS Synth Biol. 2015 Mar 20;4(3):342-9. doi: 10.1021/sb500194z. Epub 2014 May 21. ACS Synth Biol. 2015. PMID: 24847672
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