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82 results
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A faster circular binary segmentation algorithm for the analysis of array CGH data.
Venkatraman ES, Olshen AB. Venkatraman ES, et al. Among authors: olshen ab. Bioinformatics. 2007 Mar 15;23(6):657-63. doi: 10.1093/bioinformatics/btl646. Epub 2007 Jan 18. Bioinformatics. 2007. PMID: 17234643
Global gene expression profiling of PAX-FKHR fusion-positive alveolar and PAX-FKHR fusion-negative embryonal rhabdomyosarcomas.
Laé M, Ahn EH, Mercado GE, Chuai S, Edgar M, Pawel BR, Olshen A, Barr FG, Ladanyi M. Laé M, et al. J Pathol. 2007 Jun;212(2):143-51. doi: 10.1002/path.2170. J Pathol. 2007. PMID: 17471488
In vivo differentiation and genomic evolution in adult male germ cell tumors.
Korkola JE, Heck S, Olshen AB, Reuter VE, Bosl GJ, Houldsworth J, Chaganti RS. Korkola JE, et al. Among authors: olshen ab. Genes Chromosomes Cancer. 2008 Jan;47(1):43-55. doi: 10.1002/gcc.20504. Genes Chromosomes Cancer. 2008. PMID: 17943972
Combining integrated genomics and functional genomics to dissect the biology of a cancer-associated, aberrant transcription factor, the ASPSCR1-TFE3 fusion oncoprotein.
Kobos R, Nagai M, Tsuda M, Merl MY, Saito T, Laé M, Mo Q, Olshen A, Lianoglou S, Leslie C, Ostrovnaya I, Antczak C, Djaballah H, Ladanyi M. Kobos R, et al. J Pathol. 2013 Apr;229(5):743-754. doi: 10.1002/path.4158. Epub 2013 Mar 5. J Pathol. 2013. PMID: 23288701 Free PMC article.
Identification of a novel, recurrent HEY1-NCOA2 fusion in mesenchymal chondrosarcoma based on a genome-wide screen of exon-level expression data.
Wang L, Motoi T, Khanin R, Olshen A, Mertens F, Bridge J, Dal Cin P, Antonescu CR, Singer S, Hameed M, Bovee JV, Hogendoorn PC, Socci N, Ladanyi M. Wang L, et al. Genes Chromosomes Cancer. 2012 Feb;51(2):127-39. doi: 10.1002/gcc.20937. Epub 2011 Oct 27. Genes Chromosomes Cancer. 2012. PMID: 22034177 Free PMC article.
Breast tumor copy number aberration phenotypes and genomic instability.
Fridlyand J, Snijders AM, Ylstra B, Li H, Olshen A, Segraves R, Dairkee S, Tokuyasu T, Ljung BM, Jain AN, McLennan J, Ziegler J, Chin K, Devries S, Feiler H, Gray JW, Waldman F, Pinkel D, Albertson DG. Fridlyand J, et al. BMC Cancer. 2006 Apr 18;6:96. doi: 10.1186/1471-2407-6-96. BMC Cancer. 2006. PMID: 16620391 Free PMC article.
Parent-specific copy number in paired tumor-normal studies using circular binary segmentation.
Olshen AB, Bengtsson H, Neuvial P, Spellman PT, Olshen RA, Seshan VE. Olshen AB, et al. Among authors: olshen ra. Bioinformatics. 2011 Aug 1;27(15):2038-46. doi: 10.1093/bioinformatics/btr329. Epub 2011 Jun 11. Bioinformatics. 2011. PMID: 21666266 Free PMC article.
Deriving quantitative conclusions from microarray expression data.
Olshen AB, Jain AN. Olshen AB, et al. Bioinformatics. 2002 Jul;18(7):961-70. doi: 10.1093/bioinformatics/18.7.961. Bioinformatics. 2002. PMID: 12117794
Array-based comparative genomic hybridization for the differential diagnosis of renal cell cancer.
Wilhelm M, Veltman JA, Olshen AB, Jain AN, Moore DH, Presti JC Jr, Kovacs G, Waldman FM. Wilhelm M, et al. Among authors: olshen ab. Cancer Res. 2002 Feb 15;62(4):957-60. Cancer Res. 2002. PMID: 11861363
Pattern discovery and cancer gene identification in integrated cancer genomic data.
Mo Q, Wang S, Seshan VE, Olshen AB, Schultz N, Sander C, Powers RS, Ladanyi M, Shen R. Mo Q, et al. Among authors: olshen ab. Proc Natl Acad Sci U S A. 2013 Mar 12;110(11):4245-50. doi: 10.1073/pnas.1208949110. Epub 2013 Feb 21. Proc Natl Acad Sci U S A. 2013. PMID: 23431203 Free PMC article.
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