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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2013 1
2014 1
2015 2
2016 3
2017 3
2018 5
2019 6
2020 4
2021 4
2022 4
2023 2

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27 results

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Page 1
CRISPR-Cas bioinformatics.
Alkhnbashi OS, Meier T, Mitrofanov A, Backofen R, Voß B. Alkhnbashi OS, et al. Methods. 2020 Feb 1;172:3-11. doi: 10.1016/j.ymeth.2019.07.013. Epub 2019 Jul 19. Methods. 2020. PMID: 31326596 Review.
An updated evolutionary classification of CRISPR-Cas systems.
Makarova KS, Wolf YI, Alkhnbashi OS, Costa F, Shah SA, Saunders SJ, Barrangou R, Brouns SJ, Charpentier E, Haft DH, Horvath P, Moineau S, Mojica FJ, Terns RM, Terns MP, White MF, Yakunin AF, Garrett RA, van der Oost J, Backofen R, Koonin EV. Makarova KS, et al. Among authors: alkhnbashi os. Nat Rev Microbiol. 2015 Nov;13(11):722-36. doi: 10.1038/nrmicro3569. Epub 2015 Sep 28. Nat Rev Microbiol. 2015. PMID: 26411297 Free PMC article. Review.
Evolutionary classification of CRISPR-Cas systems: a burst of class 2 and derived variants.
Makarova KS, Wolf YI, Iranzo J, Shmakov SA, Alkhnbashi OS, Brouns SJJ, Charpentier E, Cheng D, Haft DH, Horvath P, Moineau S, Mojica FJM, Scott D, Shah SA, Siksnys V, Terns MP, Venclovas Č, White MF, Yakunin AF, Yan W, Zhang F, Garrett RA, Backofen R, van der Oost J, Barrangou R, Koonin EV. Makarova KS, et al. Among authors: alkhnbashi os. Nat Rev Microbiol. 2020 Feb;18(2):67-83. doi: 10.1038/s41579-019-0299-x. Epub 2019 Dec 19. Nat Rev Microbiol. 2020. PMID: 31857715 Free PMC article. Review.
CRISPR-Cas systems in multicellular cyanobacteria.
Hou S, Brenes-Álvarez M, Reimann V, Alkhnbashi OS, Backofen R, Muro-Pastor AM, Hess WR. Hou S, et al. Among authors: alkhnbashi os. RNA Biol. 2019 Apr;16(4):518-529. doi: 10.1080/15476286.2018.1493330. Epub 2018 Aug 15. RNA Biol. 2019. PMID: 29995583 Free PMC article.
CRISPRtracrRNA: robust approach for CRISPR tracrRNA detection.
Mitrofanov A, Ziemann M, Alkhnbashi OS, Hess WR, Backofen R. Mitrofanov A, et al. Among authors: alkhnbashi os. Bioinformatics. 2022 Sep 16;38(Suppl_2):ii42-ii48. doi: 10.1093/bioinformatics/btac466. Bioinformatics. 2022. PMID: 36124799 Free PMC article.
Casboundary: automated definition of integral Cas cassettes.
Padilha VA, Alkhnbashi OS, Tran VD, Shah SA, Carvalho ACPLF, Backofen R. Padilha VA, et al. Among authors: alkhnbashi os. Bioinformatics. 2021 Jun 16;37(10):1352-1359. doi: 10.1093/bioinformatics/btaa984. Bioinformatics. 2021. PMID: 33226067 Free PMC article.
Characterizing leader sequences of CRISPR loci.
Alkhnbashi OS, Shah SA, Garrett RA, Saunders SJ, Costa F, Backofen R. Alkhnbashi OS, et al. Bioinformatics. 2016 Sep 1;32(17):i576-i585. doi: 10.1093/bioinformatics/btw454. Bioinformatics. 2016. PMID: 27587677
CRISPRloci: comprehensive and accurate annotation of CRISPR-Cas systems.
Alkhnbashi OS, Mitrofanov A, Bonidia R, Raden M, Tran VD, Eggenhofer F, Shah SA, Öztürk E, Padilha VA, Sanches DS, de Carvalho ACPLF, Backofen R. Alkhnbashi OS, et al. Nucleic Acids Res. 2021 Jul 2;49(W1):W125-W130. doi: 10.1093/nar/gkab456. Nucleic Acids Res. 2021. PMID: 34133710 Free PMC article.
The nuts and bolts of the Haloferax CRISPR-Cas system I-B.
Maier LK, Stachler AE, Brendel J, Stoll B, Fischer S, Haas KA, Schwarz TS, Alkhnbashi OS, Sharma K, Urlaub H, Backofen R, Gophna U, Marchfelder A. Maier LK, et al. Among authors: alkhnbashi os. RNA Biol. 2019 Apr;16(4):469-480. doi: 10.1080/15476286.2018.1460994. Epub 2018 May 21. RNA Biol. 2019. PMID: 29649958 Free PMC article.
27 results