Ortiz AR - Search Results

1

Cross-over between discrete and continuous protein structure space: insights into automatic classification and networks of protein structures.

Pascual-García A, Abia D, Ortiz AR, Bastolla U. Pascual-García A, et al. Among authors: ortiz ar. PLoS Comput Biol. 2009 Mar;5(3):e1000331. doi: 10.1371/journal.pcbi.1000331. Epub 2009 Mar 27. PLoS Comput Biol. 2009. PMID: 19325884 Free PMC article.

2

Effective connectivity profile: a structural representation that evidences the relationship between protein structures and sequences.

Bastolla U, Ortíz AR, Porto M, Teichert F. Bastolla U, et al. Among authors: ortiz ar. Proteins. 2008 Dec;73(4):872-88. doi: 10.1002/prot.22113. Proteins. 2008. PMID: 18536008

3

Local interactions in protein folding determined through an inverse folding model.

Bastolla U, Porto M, Ortíz AR. Bastolla U, et al. Among authors: ortiz ar. Proteins. 2008 Apr;71(1):278-99. doi: 10.1002/prot.21730. Proteins. 2008. PMID: 17932940

4

An efficient conformational sampling method for homology modeling.

Han R, Leo-Macias A, Zerbino D, Bastolla U, Contreras-Moreira B, Ortiz AR. Han R, et al. Among authors: ortiz ar. Proteins. 2008 Apr;71(1):175-88. doi: 10.1002/prot.21672. Proteins. 2008. PMID: 17985353

5

Dual activation of pathways regulated by steroid receptors and peptide growth factors in primary prostate cancer revealed by Factor Analysis of microarray data.

Lozano JJ, Soler M, Bermudo R, Abia D, Fernandez PL, Thomson TM, Ortiz AR. Lozano JJ, et al. Among authors: ortiz ar. BMC Genomics. 2005 Aug 17;6:109. doi: 10.1186/1471-2164-6-109. BMC Genomics. 2005. PMID: 16107210 Free PMC article.

6

Microarray-based identification of antigenic variants of foot-and-mouth disease virus: a bioinformatics quality assessment.

Martín V, Perales C, Abia D, Ortíz AR, Domingo E, Briones C. Martín V, et al. Among authors: ortiz ar. BMC Genomics. 2006 May 18;7:117. doi: 10.1186/1471-2164-7-117. BMC Genomics. 2006. PMID: 16709242 Free PMC article.

7

Discovery of genomic alterations through coregulation analysis of closely linked genes: a frequent gain in 17q25.3 in prostate cancer.

Bermudo R, Abia D, Benitez D, Carrió A, Vilella R, Ortiz AR, Thomson TM, Fernández PL. Bermudo R, et al. Among authors: ortiz ar. Ann N Y Acad Sci. 2010 Oct;1210:17-24. doi: 10.1111/j.1749-6632.2010.05780.x. Ann N Y Acad Sci. 2010. PMID: 20973795

8

Co-regulation analysis of closely linked genes identifies a highly recurrent gain on chromosome 17q25.3 in prostate cancer.

Bermudo R, Abia D, Ferrer B, Nayach I, Benguria A, Zaballos A, del Rey J, Miró R, Campo E, Martínez-A C, Ortiz AR, Fernández PL, Thomson TM. Bermudo R, et al. Among authors: ortiz ar. BMC Cancer. 2008 Oct 30;8:315. doi: 10.1186/1471-2407-8-315. BMC Cancer. 2008. PMID: 18973659 Free PMC article.

9

An analysis of core deformations in protein superfamilies.

Leo-Macias A, Lopez-Romero P, Lupyan D, Zerbino D, Ortiz AR. Leo-Macias A, et al. Among authors: ortiz ar. Biophys J. 2005 Feb;88(2):1291-9. doi: 10.1529/biophysj.104.052449. Epub 2004 Nov 12. Biophys J. 2005. PMID: 15542556 Free PMC article.

10

Core deformations in protein families: a physical perspective.

Leo-Macias A, Lopez-Romero P, Lupyan D, Zerbino D, Ortiz AR. Leo-Macias A, et al. Among authors: ortiz ar. Biophys Chem. 2005 Apr 1;115(2-3):125-8. doi: 10.1016/j.bpc.2004.12.016. Epub 2005 Jan 18. Biophys Chem. 2005. PMID: 15752593

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