P01-GM63208/GM/NIGMS NIH HHS/United States[Grant Number] - Search Results

Year	Number of Results
2004	2
2005	1
2006	4
2007	2
2009	1
2022	0

1

Support vector ordinal regression.

Chu W, Keerthi SS. Chu W, et al. Neural Comput. 2007 Mar;19(3):792-815. doi: 10.1162/neco.2007.19.3.792. Neural Comput. 2007. PMID: 17298234 Free article.

2

JAFA: a protein function annotation meta-server.

Friedberg I, Harder T, Godzik A. Friedberg I, et al. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W379-81. doi: 10.1093/nar/gkl045. Nucleic Acids Res. 2006. PMID: 16845030 Free PMC article.

3

Learning about protein hydrogen bonding by minimizing contrastive divergence.

Podtelezhnikov AA, Ghahramani Z, Wild DL. Podtelezhnikov AA, et al. Proteins. 2007 Feb 15;66(3):588-99. doi: 10.1002/prot.21247. Proteins. 2007. PMID: 17109405

4

Modeling and analyzing three-dimensional structures of human disease proteins.

Ye Y, Li Z, Godzik A. Ye Y, et al. Pac Symp Biocomput. 2006:439-50. Pac Symp Biocomput. 2006. PMID: 17094259 Free article.

5

Bayesian support vector regression using a unified loss function.

Chu W, Keerthi SS, Ong CJ. Chu W, et al. IEEE Trans Neural Netw. 2004 Jan;15(1):29-44. doi: 10.1109/TNN.2003.820830. IEEE Trans Neural Netw. 2004. PMID: 15387245 Free article.

6

Identifying protein complexes in high-throughput protein interaction screens using an infinite latent feature model.

Chu W, Ghahramani Z, Krause R, Wild DL. Chu W, et al. Pac Symp Biocomput. 2006:231-42. Pac Symp Biocomput. 2006. PMID: 17094242 Free article.

7

The Molecular Biology Toolkit (MBT): a modular platform for developing molecular visualization applications.

Moreland JL, Gramada A, Buzko OV, Zhang Q, Bourne PE. Moreland JL, et al. BMC Bioinformatics. 2005 Feb 6;6:21. doi: 10.1186/1471-2105-6-21. BMC Bioinformatics. 2005. PMID: 15694009 Free PMC article.

8

Reconstruction and stability of secondary structure elements in the context of protein structure prediction.

Podtelezhnikov AA, Wild DL. Podtelezhnikov AA, et al. Biophys J. 2009 Jun 3;96(11):4399-408. doi: 10.1016/j.bpj.2009.02.057. Biophys J. 2009. PMID: 19486664 Free PMC article.

9

Bayesian segmental models with multiple sequence alignment profiles for protein secondary structure and contact map prediction.

Chu W, Ghahramani Z, Podtelezhnikov A, Wild DL. Chu W, et al. IEEE/ACM Trans Comput Biol Bioinform. 2006 Apr-Jun;3(2):98-113. doi: 10.1109/TCBB.2006.17. IEEE/ACM Trans Comput Biol Bioinform. 2006. PMID: 17048397

10

Clustering protein sequence and structure space with infinite Gaussian mixture models.

Dubey A, Hwang S, Rangel C, Rasmussen CE, Ghahramani Z, Wild DL. Dubey A, et al. Pac Symp Biocomput. 2004:399-410. doi: 10.1142/9789812704856_0038. Pac Symp Biocomput. 2004. PMID: 14992520 Free article.

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