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IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes.
Hadjithomas M, Chen IA, Chu K, Huang J, Ratner A, Palaniappan K, Andersen E, Markowitz V, Kyrpides NC, Ivanova NN. Hadjithomas M, et al. Among authors: palaniappan k. Nucleic Acids Res. 2017 Jan 4;45(D1):D560-D565. doi: 10.1093/nar/gkw1103. Epub 2016 Nov 29. Nucleic Acids Res. 2017. PMID: 27903896 Free PMC article.
The integrated microbial genomes (IMG) system.
Markowitz VM, Korzeniewski F, Palaniappan K, Szeto E, Werner G, Padki A, Zhao X, Dubchak I, Hugenholtz P, Anderson I, Lykidis A, Mavromatis K, Ivanova N, Kyrpides NC. Markowitz VM, et al. Among authors: palaniappan k. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D344-8. doi: 10.1093/nar/gkj024. Nucleic Acids Res. 2006. PMID: 16381883 Free PMC article.
IMG/M: a data management and analysis system for metagenomes.
Markowitz VM, Ivanova NN, Szeto E, Palaniappan K, Chu K, Dalevi D, Chen IM, Grechkin Y, Dubchak I, Anderson I, Lykidis A, Mavromatis K, Hugenholtz P, Kyrpides NC. Markowitz VM, et al. Among authors: palaniappan k. Nucleic Acids Res. 2008 Jan;36(Database issue):D534-8. doi: 10.1093/nar/gkm869. Epub 2007 Oct 11. Nucleic Acids Res. 2008. PMID: 17932063 Free PMC article.
The integrated microbial genomes system: an expanding comparative analysis resource.
Markowitz VM, Chen IM, Palaniappan K, Chu K, Szeto E, Grechkin Y, Ratner A, Anderson I, Lykidis A, Mavromatis K, Ivanova NN, Kyrpides NC. Markowitz VM, et al. Among authors: palaniappan k. Nucleic Acids Res. 2010 Jan;38(Database issue):D382-90. doi: 10.1093/nar/gkp887. Epub 2009 Oct 28. Nucleic Acids Res. 2010. PMID: 19864254 Free PMC article.
IMG/M: the integrated metagenome data management and comparative analysis system.
Markowitz VM, Chen IM, Chu K, Szeto E, Palaniappan K, Grechkin Y, Ratner A, Jacob B, Pati A, Huntemann M, Liolios K, Pagani I, Anderson I, Mavromatis K, Ivanova NN, Kyrpides NC. Markowitz VM, et al. Among authors: palaniappan k. Nucleic Acids Res. 2012 Jan;40(Database issue):D123-9. doi: 10.1093/nar/gkr975. Epub 2011 Nov 15. Nucleic Acids Res. 2012. PMID: 22086953 Free PMC article.
IMG: the Integrated Microbial Genomes database and comparative analysis system.
Markowitz VM, Chen IM, Palaniappan K, Chu K, Szeto E, Grechkin Y, Ratner A, Jacob B, Huang J, Williams P, Huntemann M, Anderson I, Mavromatis K, Ivanova NN, Kyrpides NC. Markowitz VM, et al. Among authors: palaniappan k. Nucleic Acids Res. 2012 Jan;40(Database issue):D115-22. doi: 10.1093/nar/gkr1044. Nucleic Acids Res. 2012. PMID: 22194640 Free PMC article.
IMG/M 4 version of the integrated metagenome comparative analysis system.
Markowitz VM, Chen IM, Chu K, Szeto E, Palaniappan K, Pillay M, Ratner A, Huang J, Pagani I, Tringe S, Huntemann M, Billis K, Varghese N, Tennessen K, Mavromatis K, Pati A, Ivanova NN, Kyrpides NC. Markowitz VM, et al. Among authors: palaniappan k. Nucleic Acids Res. 2014 Jan;42(Database issue):D568-73. doi: 10.1093/nar/gkt919. Epub 2013 Oct 16. Nucleic Acids Res. 2014. PMID: 24136997 Free PMC article.
IMG 4 version of the integrated microbial genomes comparative analysis system.
Markowitz VM, Chen IM, Palaniappan K, Chu K, Szeto E, Pillay M, Ratner A, Huang J, Woyke T, Huntemann M, Anderson I, Billis K, Varghese N, Mavromatis K, Pati A, Ivanova NN, Kyrpides NC. Markowitz VM, et al. Among authors: palaniappan k. Nucleic Acids Res. 2014 Jan;42(Database issue):D560-7. doi: 10.1093/nar/gkt963. Epub 2013 Oct 27. Nucleic Acids Res. 2014. PMID: 24165883 Free PMC article.
351 results