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Page 1
Automated Library Construction and Analysis for High-Throughput Nanopore Sequencing of SARS-CoV-2.
Coope RJN, Matic N, Pandoh PK, Corbett RD, Smailus DE, Pleasance S, Lowe CF, Ritchie G, Chorlton SD, Young M, Ally AA, Asano JK, Carlsen RE, Chahal SS, Zhao Y, Holmes DT, Romney MG, Jones SJM, Marra MA. Coope RJN, et al. Among authors: pandoh pk. J Appl Lab Med. 2022 Sep 1;7(5):1025-1036. doi: 10.1093/jalm/jfac054. J Appl Lab Med. 2022. PMID: 35723286 Free PMC article.
An efficient strategy for large-scale high-throughput transposon-mediated sequencing of cDNA clones.
Butterfield YS, Marra MA, Asano JK, Chan SY, Guin R, Krzywinski MI, Lee SS, MacDonald KW, Mathewson CA, Olson TE, Pandoh PK, Prabhu AL, Schnerch A, Skalska U, Smailus DE, Stott JM, Tsai MI, Yang GS, Zuyderduyn SD, Schein JE, Jones SJ. Butterfield YS, et al. Among authors: pandoh pk. Nucleic Acids Res. 2002 Jun 1;30(11):2460-8. doi: 10.1093/nar/30.11.2460. Nucleic Acids Res. 2002. PMID: 12034834 Free PMC article.
The Genome sequence of the SARS-associated coronavirus.
Marra MA, Jones SJ, Astell CR, Holt RA, Brooks-Wilson A, Butterfield YS, Khattra J, Asano JK, Barber SA, Chan SY, Cloutier A, Coughlin SM, Freeman D, Girn N, Griffith OL, Leach SR, Mayo M, McDonald H, Montgomery SB, Pandoh PK, Petrescu AS, Robertson AG, Schein JE, Siddiqui A, Smailus DE, Stott JM, Yang GS, Plummer F, Andonov A, Artsob H, Bastien N, Bernard K, Booth TF, Bowness D, Czub M, Drebot M, Fernando L, Flick R, Garbutt M, Gray M, Grolla A, Jones S, Feldmann H, Meyers A, Kabani A, Li Y, Normand S, Stroher U, Tipples GA, Tyler S, Vogrig R, Ward D, Watson B, Brunham RC, Krajden M, Petric M, Skowronski DM, Upton C, Roper RL. Marra MA, et al. Among authors: pandoh pk. Science. 2003 May 30;300(5624):1399-404. doi: 10.1126/science.1085953. Epub 2003 May 1. Science. 2003. PMID: 12730501
Integrated and sequence-ordered BAC- and YAC-based physical maps for the rat genome.
Krzywinski M, Wallis J, Gösele C, Bosdet I, Chiu R, Graves T, Hummel O, Layman D, Mathewson C, Wye N, Zhu B, Albracht D, Asano J, Barber S, Brown-John M, Chan S, Chand S, Cloutier A, Davito J, Fjell C, Gaige T, Ganten D, Girn N, Guggenheimer K, Himmelbauer H, Kreitler T, Leach S, Lee D, Lehrach H, Mayo M, Mead K, Olson T, Pandoh P, Prabhu AL, Shin H, Tänzer S, Thompson J, Tsai M, Walker J, Yang G, Sekhon M, Hillier L, Zimdahl H, Marziali A, Osoegawa K, Zhao S, Siddiqui A, de Jong PJ, Warren W, Mardis E, McPherson JD, Wilson R, Hübner N, Jones S, Marra M, Schein J. Krzywinski M, et al. Genome Res. 2004 Apr;14(4):766-79. doi: 10.1101/gr.2336604. Genome Res. 2004. PMID: 15060021 Free PMC article.
A set of BAC clones spanning the human genome.
Krzywinski M, Bosdet I, Smailus D, Chiu R, Mathewson C, Wye N, Barber S, Brown-John M, Chan S, Chand S, Cloutier A, Girn N, Lee D, Masson A, Mayo M, Olson T, Pandoh P, Prabhu AL, Schoenmakers E, Tsai M, Albertson D, Lam W, Choy CO, Osoegawa K, Zhao S, de Jong PJ, Schein J, Jones S, Marra MA. Krzywinski M, et al. Nucleic Acids Res. 2004 Jul 9;32(12):3651-60. doi: 10.1093/nar/gkh700. Print 2004. Nucleic Acids Res. 2004. PMID: 15247347 Free PMC article.
A mouse atlas of gene expression: large-scale digital gene-expression profiles from precisely defined developing C57BL/6J mouse tissues and cells.
Siddiqui AS, Khattra J, Delaney AD, Zhao Y, Astell C, Asano J, Babakaiff R, Barber S, Beland J, Bohacec S, Brown-John M, Chand S, Charest D, Charters AM, Cullum R, Dhalla N, Featherstone R, Gerhard DS, Hoffman B, Holt RA, Hou J, Kuo BY, Lee LL, Lee S, Leung D, Ma K, Matsuo C, Mayo M, McDonald H, Prabhu AL, Pandoh P, Riggins GJ, de Algara TR, Rupert JL, Smailus D, Stott J, Tsai M, Varhol R, Vrljicak P, Wong D, Wu MK, Xie YY, Yang G, Zhang I, Hirst M, Jones SJ, Helgason CD, Simpson EM, Hoodless PA, Marra MA. Siddiqui AS, et al. Proc Natl Acad Sci U S A. 2005 Dec 20;102(51):18485-90. doi: 10.1073/pnas.0509455102. Epub 2005 Dec 13. Proc Natl Acad Sci U S A. 2005. PMID: 16352711 Free PMC article.
Large-scale production of SAGE libraries from microdissected tissues, flow-sorted cells, and cell lines.
Khattra J, Delaney AD, Zhao Y, Siddiqui A, Asano J, McDonald H, Pandoh P, Dhalla N, Prabhu AL, Ma K, Lee S, Ally A, Tam A, Sa D, Rogers S, Charest D, Stott J, Zuyderduyn S, Varhol R, Eaves C, Jones S, Holt R, Hirst M, Hoodless PA, Marra MA. Khattra J, et al. Genome Res. 2007 Jan;17(1):108-16. doi: 10.1101/gr.5488207. Epub 2006 Nov 29. Genome Res. 2007. PMID: 17135571 Free PMC article.
LongSAGE profiling of nine human embryonic stem cell lines.
Hirst M, Delaney A, Rogers SA, Schnerch A, Persaud DR, O'Connor MD, Zeng T, Moksa M, Fichter K, Mah D, Go A, Morin RD, Baross A, Zhao Y, Khattra J, Prabhu AL, Pandoh P, McDonald H, Asano J, Dhalla N, Ma K, Lee S, Ally A, Chahal N, Menzies S, Siddiqui A, Holt R, Jones S, Gerhard DS, Thomson JA, Eaves CJ, Marra MA. Hirst M, et al. Genome Biol. 2007;8(6):R113. doi: 10.1186/gb-2007-8-6-r113. Genome Biol. 2007. PMID: 17570852 Free PMC article.
Digital gene expression by tag sequencing on the illumina genome analyzer.
Morrissy S, Zhao Y, Delaney A, Asano J, Dhalla N, Li I, McDonald H, Pandoh P, Prabhu AL, Tam A, Hirst M, Marra M. Morrissy S, et al. Curr Protoc Hum Genet. 2010 Apr;Chapter 11:Unit 11.11.1-36. doi: 10.1002/0471142905.hg1111s65. Curr Protoc Hum Genet. 2010. PMID: 20373513
42 results