Integrative Analysis of Transcriptome and Metabolome to Illuminate the Protective Effects of Didymin against Acute Hepatic Injury

Mediators Inflamm. 2023 Jan 12:2023:6051946. doi: 10.1155/2023/6051946. eCollection 2023.

Abstract

Based on the multiomics analysis, this study is aimed at investigating the underlying mechanism of didymin against acute liver injury (ALI). The mice were administrated with didymin for 2 weeks, followed by injection with lipopolysaccharide (LPS) plus D-galactosamine (D-Gal) to induce ALI. The pathological examination revealed that didymin significantly ameliorated LPS/D-Gal-induced hepatic damage. Also, it markedly reduced proinflammatory cytokines release by inhibiting the TLR4/NF-κB pathway activation, alleviating inflammatory injury. A transcriptome analysis proved 2680 differently expressed genes (DEGs) between the model and didymin groups and suggested that the PI3K/Akt and metabolic pathways might be the most relevant targets. Meanwhile, the metabolome analysis revealed 67 differently expressed metabolites (DEMs) between the didymin and model groups that were mainly clustered into the glycerophospholipid metabolism, which was consistent with the transcriptome study. Importantly, a comprehensive analysis of both the omics indicated a strong correlation between the DEGs and DEMs, and an in-depth study demonstrated that didymin alleviated metabolic disorder and hepatocyte injury likely by inhibiting the glycerophospholipid metabolism pathway through the regulation of PLA2G4B, LPCAT3, and CEPT1 expression. In conclusion, this study demonstrates that didymin can ameliorate LPS/D-Gal-induced ALI by inhibiting the glycerophospholipid metabolism and PI3K/Akt and TLR4/NF-κB pathways.

MeSH terms

  • 1-Acylglycerophosphocholine O-Acyltransferase / genetics
  • 1-Acylglycerophosphocholine O-Acyltransferase / metabolism
  • 1-Acylglycerophosphocholine O-Acyltransferase / pharmacology
  • Animals
  • Glycerophospholipids / metabolism
  • Glycerophospholipids / pharmacology
  • Group IV Phospholipases A2 / genetics
  • Group IV Phospholipases A2 / metabolism
  • Group IV Phospholipases A2 / pharmacology
  • Lipopolysaccharides / pharmacology
  • Liver / metabolism
  • Metabolome
  • Mice
  • NF-kappa B* / metabolism
  • Phosphatidylinositol 3-Kinases / metabolism
  • Proto-Oncogene Proteins c-akt* / metabolism
  • Toll-Like Receptor 4 / metabolism
  • Transcriptome

Substances

  • NF-kappa B
  • didymin
  • Proto-Oncogene Proteins c-akt
  • Phosphatidylinositol 3-Kinases
  • Lipopolysaccharides
  • Toll-Like Receptor 4
  • Glycerophospholipids
  • LPCAT3 protein, mouse
  • 1-Acylglycerophosphocholine O-Acyltransferase
  • Pla2g4b protein, mouse
  • Group IV Phospholipases A2