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Atg1 kinase organizes autophagosome formation by phosphorylating Atg9.
Papinski D, Kraft C. Papinski D, et al. Autophagy. 2014 Jul;10(7):1338-40. doi: 10.4161/auto.28971. Epub 2014 Apr 28. Autophagy. 2014. PMID: 24905091 Free PMC article.
Early steps in autophagy depend on direct phosphorylation of Atg9 by the Atg1 kinase.
Papinski D, Schuschnig M, Reiter W, Wilhelm L, Barnes CA, Maiolica A, Hansmann I, Pfaffenwimmer T, Kijanska M, Stoffel I, Lee SS, Brezovich A, Lou JH, Turk BE, Aebersold R, Ammerer G, Peter M, Kraft C. Papinski D, et al. Mol Cell. 2014 Feb 6;53(3):471-83. doi: 10.1016/j.molcel.2013.12.011. Epub 2014 Jan 16. Mol Cell. 2014. PMID: 24440502 Free PMC article.
Hrr25 kinase promotes selective autophagy by phosphorylating the cargo receptor Atg19.
Pfaffenwimmer T, Reiter W, Brach T, Nogellova V, Papinski D, Schuschnig M, Abert C, Ammerer G, Martens S, Kraft C. Pfaffenwimmer T, et al. EMBO Rep. 2014 Aug;15(8):862-70. doi: 10.15252/embr.201438932. Epub 2014 Jun 26. EMBO Rep. 2014. PMID: 24968893 Free PMC article.
Regulation of Autophagy By Signaling Through the Atg1/ULK1 Complex.
Papinski D, Kraft C. Papinski D, et al. J Mol Biol. 2016 May 8;428(9 Pt A):1725-41. doi: 10.1016/j.jmb.2016.03.030. Epub 2016 Apr 6. J Mol Biol. 2016. PMID: 27059781 Review.
Two Independent Pathways within Selective Autophagy Converge to Activate Atg1 Kinase at the Vacuole.
Torggler R, Papinski D, Brach T, Bas L, Schuschnig M, Pfaffenwimmer T, Rohringer S, Matzhold T, Schweida D, Brezovich A, Kraft C. Torggler R, et al. Among authors: papinski d. Mol Cell. 2016 Oct 20;64(2):221-235. doi: 10.1016/j.molcel.2016.09.008. Mol Cell. 2016. PMID: 27768871 Free article.
Assays to Monitor Autophagy in Saccharomyces cerevisiae.
Torggler R, Papinski D, Kraft C. Torggler R, et al. Among authors: papinski d. Cells. 2017 Jul 13;6(3):23. doi: 10.3390/cells6030023. Cells. 2017. PMID: 28703742 Free PMC article. Review.
Atg9 establishes Atg2-dependent contact sites between the endoplasmic reticulum and phagophores.
Gómez-Sánchez R, Rose J, Guimarães R, Mari M, Papinski D, Rieter E, Geerts WJ, Hardenberg R, Kraft C, Ungermann C, Reggiori F. Gómez-Sánchez R, et al. Among authors: papinski d. J Cell Biol. 2018 Aug 6;217(8):2743-2763. doi: 10.1083/jcb.201710116. Epub 2018 May 30. J Cell Biol. 2018. PMID: 29848619 Free PMC article.
Reconstitution reveals Ykt6 as the autophagosomal SNARE in autophagosome-vacuole fusion.
Bas L, Papinski D, Licheva M, Torggler R, Rohringer S, Schuschnig M, Kraft C. Bas L, et al. Among authors: papinski d. J Cell Biol. 2018 Oct 1;217(10):3656-3669. doi: 10.1083/jcb.201804028. Epub 2018 Aug 10. J Cell Biol. 2018. PMID: 30097514 Free PMC article.
Ykt6 mediates autophagosome-vacuole fusion.
Bas L, Papinski D, Kraft C. Bas L, et al. Among authors: papinski d. Mol Cell Oncol. 2018 Oct 4;5(6):e1526006. doi: 10.1080/23723556.2018.1526006. eCollection 2018. Mol Cell Oncol. 2018. PMID: 30525099 Free PMC article.
An Early mtUPR: Redistribution of the Nuclear Transcription Factor Rox1 to Mitochondria Protects against Intramitochondrial Proteotoxic Aggregates.
Poveda-Huertes D, Matic S, Marada A, Habernig L, Licheva M, Myketin L, Gilsbach R, Tosal-Castano S, Papinski D, Mulica P, Kretz O, Kücükköse C, Taskin AA, Hein L, Kraft C, Büttner S, Meisinger C, Vögtle FN. Poveda-Huertes D, et al. Among authors: papinski d. Mol Cell. 2020 Jan 2;77(1):180-188.e9. doi: 10.1016/j.molcel.2019.09.026. Epub 2019 Oct 17. Mol Cell. 2020. PMID: 31630969 Free PMC article.
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