Parca L - Search Results

1

PTMcode: a database of known and predicted functional associations between post-translational modifications in proteins.

Minguez P, Letunic I, Parca L, Bork P. Minguez P, et al. Among authors: parca l. Nucleic Acids Res. 2013 Jan;41(Database issue):D306-11. doi: 10.1093/nar/gks1230. Epub 2012 Nov 28. Nucleic Acids Res. 2013. PMID: 23193284 Free PMC article.

2

Spatiotemporal variation of mammalian protein complex stoichiometries.

Ori A, Iskar M, Buczak K, Kastritis P, Parca L, Andrés-Pons A, Singer S, Bork P, Beck M. Ori A, et al. Among authors: parca l. Genome Biol. 2016 Mar 14;17:47. doi: 10.1186/s13059-016-0912-5. Genome Biol. 2016. PMID: 26975353 Free PMC article.

3

Quantifying compartment-associated variations of protein abundance in proteomics data.

Parca L, Beck M, Bork P, Ori A. Parca L, et al. Mol Syst Biol. 2018 Jul 2;14(7):e8131. doi: 10.15252/msb.20178131. Mol Syst Biol. 2018. PMID: 29967062 Free PMC article.

4

Systematic identification of phosphorylation-mediated protein interaction switches.

Betts MJ, Wichmann O, Utz M, Andre T, Petsalaki E, Minguez P, Parca L, Roth FP, Gavin AC, Bork P, Russell RB. Betts MJ, et al. Among authors: parca l. PLoS Comput Biol. 2017 Mar 27;13(3):e1005462. doi: 10.1371/journal.pcbi.1005462. eCollection 2017 Mar. PLoS Comput Biol. 2017. PMID: 28346509 Free PMC article.

5

Histone Deacetylase Inhibitors (HDACi) Cause the Selective Depletion of Bromodomain Containing Proteins (BCPs).

Mackmull MT, Iskar M, Parca L, Singer S, Bork P, Ori A, Beck M. Mackmull MT, et al. Among authors: parca l. Mol Cell Proteomics. 2015 May;14(5):1350-60. doi: 10.1074/mcp.M114.042499. Epub 2015 Mar 9. Mol Cell Proteomics. 2015. PMID: 25755299 Free PMC article.

6

PTMcode v2: a resource for functional associations of post-translational modifications within and between proteins.

Minguez P, Letunic I, Parca L, Garcia-Alonso L, Dopazo J, Huerta-Cepas J, Bork P. Minguez P, et al. Among authors: parca l. Nucleic Acids Res. 2015 Jan;43(Database issue):D494-502. doi: 10.1093/nar/gku1081. Epub 2014 Oct 31. Nucleic Acids Res. 2015. PMID: 25361965 Free PMC article.

7

Deciphering a global network of functionally associated post-translational modifications.

Minguez P, Parca L, Diella F, Mende DR, Kumar R, Helmer-Citterich M, Gavin AC, van Noort V, Bork P. Minguez P, et al. Among authors: parca l. Mol Syst Biol. 2012 Jul 17;8:599. doi: 10.1038/msb.2012.31. Mol Syst Biol. 2012. PMID: 22806145 Free PMC article.

8

Nucleos: a web server for the identification of nucleotide-binding sites in protein structures.

Parca L, Ferré F, Ausiello G, Helmer-Citterich M. Parca L, et al. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W281-5. doi: 10.1093/nar/gkt390. Epub 2013 May 22. Nucleic Acids Res. 2013. PMID: 23703207 Free PMC article.

9

Phosphate binding sites identification in protein structures.

Parca L, Gherardini PF, Helmer-Citterich M, Ausiello G. Parca L, et al. Nucleic Acids Res. 2011 Mar;39(4):1231-42. doi: 10.1093/nar/gkq987. Epub 2010 Oct 24. Nucleic Acids Res. 2011. PMID: 20974634 Free PMC article.

10

Phosfinder: a web server for the identification of phosphate-binding sites on protein structures.

Parca L, Mangone I, Gherardini PF, Ausiello G, Helmer-Citterich M. Parca L, et al. Nucleic Acids Res. 2011 Jul;39(Web Server issue):W278-82. doi: 10.1093/nar/gkr389. Epub 2011 May 26. Nucleic Acids Res. 2011. PMID: 21622655 Free PMC article.

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