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Toward sequencing cotton (Gossypium) genomes.
Chen ZJ, Scheffler BE, Dennis E, Triplett BA, Zhang T, Guo W, Chen X, Stelly DM, Rabinowicz PD, Town CD, Arioli T, Brubaker C, Cantrell RG, Lacape JM, Ulloa M, Chee P, Gingle AR, Haigler CH, Percy R, Saha S, Wilkins T, Wright RJ, Van Deynze A, Zhu Y, Yu S, Abdurakhmonov I, Katageri I, Kumar PA, Mehboob-Ur-Rahman, Zafar Y, Yu JZ, Kohel RJ, Wendel JF, Paterson AH. Chen ZJ, et al. Among authors: Paterson AH. Plant Physiol. 2007 Dec;145(4):1303-10. doi: 10.1104/pp.107.107672. Plant Physiol. 2007. PMID: 18056866 Free PMC article. No abstract available.
Comparative genomics of grasses promises a bountiful harvest.
Paterson AH, Bowers JE, Feltus FA, Tang H, Lin L, Wang X. Paterson AH, et al. Plant Physiol. 2009 Jan;149(1):125-31. doi: 10.1104/pp.108.129262. Plant Physiol. 2009. PMID: 19126703 Free PMC article. No abstract available.
The Genome of a Southern Hemisphere Seagrass Species (Zostera muelleri).
Lee H, Golicz AA, Bayer PE, Jiao Y, Tang H, Paterson AH, Sablok G, Krishnaraj RR, Chan CK, Batley J, Kendrick GA, Larkum AW, Ralph PJ, Edwards D. Lee H, et al. Among authors: Paterson AH. Plant Physiol. 2016 Sep;172(1):272-83. doi: 10.1104/pp.16.00868. Epub 2016 Jul 3. Plant Physiol. 2016. PMID: 27373688 Free PMC article.
Sorghum expressed sequence tags identify signature genes for drought, pathogenesis, and skotomorphogenesis from a milestone set of 16,801 unique transcripts.
Pratt LH, Liang C, Shah M, Sun F, Wang H, Reid SP, Gingle AR, Paterson AH, Wing R, Dean R, Klein R, Nguyen HT, Ma HM, Zhao X, Morishige DT, Mullet JE, Cordonnier-Pratt MM. Pratt LH, et al. Among authors: Paterson AH. Plant Physiol. 2005 Oct;139(2):869-84. doi: 10.1104/pp.105.066134. Epub 2005 Sep 16. Plant Physiol. 2005. PMID: 16169961 Free PMC article.
Parallel up-regulation of the profilin gene family following independent domestication of diploid and allopolyploid cotton (Gossypium).
Bao Y, Hu G, Flagel LE, Salmon A, Bezanilla M, Paterson AH, Wang Z, Wendel JF. Bao Y, et al. Among authors: Paterson AH. Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):21152-7. doi: 10.1073/pnas.1115926109. Epub 2011 Dec 12. Proc Natl Acad Sci U S A. 2011. PMID: 22160709 Free PMC article.
Ancient gene duplicates in Gossypium (cotton) exhibit near-complete expression divergence.
Renny-Byfield S, Gallagher JP, Grover CE, Szadkowski E, Page JT, Udall JA, Wang X, Paterson AH, Wendel JF. Renny-Byfield S, et al. Among authors: Paterson AH. Genome Biol Evol. 2014 Mar;6(3):559-71. doi: 10.1093/gbe/evu037. Genome Biol Evol. 2014. PMID: 24558256 Free PMC article.
A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium).
Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, Trolinder NL, Wendel JF, Wilkins TA, Williams-Coplin TD, Wing RA, Wright RJ, Zhao X, Zhu L, Paterson AH. Rong J, et al. Among authors: Paterson AH. Genetics. 2004 Jan;166(1):389-417. doi: 10.1534/genetics.166.1.389. Genetics. 2004. PMID: 15020432 Free PMC article.
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