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Pathway analysis software: annotation errors and solutions.
Henderson-Maclennan NK, Papp JC, Talbot CC Jr, McCabe ER, Presson AP. Henderson-Maclennan NK, et al. Mol Genet Metab. 2010 Oct-Nov;101(2-3):134-40. doi: 10.1016/j.ymgme.2010.06.005. Epub 2010 Jun 22. Mol Genet Metab. 2010. PMID: 20663702 Free PMC article.
Genetic databases contain a variety of annotation errors that often go unnoticed due to the large size of modern genetic data sets. ...We examine gene symbol annotations and results from three commercial pathway analysis software (PAS) pa …
Genetic databases contain a variety of annotation errors that often go unnoticed due to the large size of modern genetic data …
CoCoTools: open-source software for building connectomes using the CoCoMac anatomical database.
Blumenfeld RS, Bliss DP, Perez F, D'Esposito M. Blumenfeld RS, et al. J Cogn Neurosci. 2014 Apr;26(4):722-45. doi: 10.1162/jocn_a_00498. Epub 2013 Oct 11. J Cogn Neurosci. 2014. PMID: 24116839
Because manual review of the anatomical literature is time consuming and error prone, computational solutions are needed to accomplish this task. Here we describe the "CoCoTools" open-source Python library, which automates collection and integration of macaque conne …
Because manual review of the anatomical literature is time consuming and error prone, computational solutions are needed to ac …
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