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The genome of the crustacean Parhyale hawaiensis, a model for animal development, regeneration, immunity and lignocellulose digestion.
Kao D, Lai AG, Stamataki E, Rosic S, Konstantinides N, Jarvis E, Di Donfrancesco A, Pouchkina-Stancheva N, Sémon M, Grillo M, Bruce H, Kumar S, Siwanowicz I, Le A, Lemire A, Eisen MB, Extavour C, Browne WE, Wolff C, Averof M, Patel NH, Sarkies P, Pavlopoulos A, Aboobaker A. Kao D, et al. Among authors: Pavlopoulos A. Elife. 2016 Nov 16;5:e20062. doi: 10.7554/eLife.20062. Elife. 2016. PMID: 27849518 Free PMC article.
Multi-view light-sheet imaging and tracking with the MaMuT software reveals the cell lineage of a direct developing arthropod limb.
Wolff C, Tinevez JY, Pietzsch T, Stamataki E, Harich B, Guignard L, Preibisch S, Shorte S, Keller PJ, Tomancak P, Pavlopoulos A. Wolff C, et al. Among authors: Pavlopoulos A. Elife. 2018 Mar 29;7:e34410. doi: 10.7554/eLife.34410. Elife. 2018. PMID: 29595475 Free PMC article.
Transgenesis in non-model organisms: the case of Parhyale.
Kontarakis Z, Pavlopoulos A. Kontarakis Z, et al. Among authors: Pavlopoulos A. Methods Mol Biol. 2014;1196:145-81. doi: 10.1007/978-1-4939-1242-1_10. Methods Mol Biol. 2014. PMID: 25151163
Knockdown of Parhyale Ultrabithorax recapitulates evolutionary changes in crustacean appendage morphology.
Liubicich DM, Serano JM, Pavlopoulos A, Kontarakis Z, Protas ME, Kwan E, Chatterjee S, Tran KD, Averof M, Patel NH. Liubicich DM, et al. Among authors: Pavlopoulos A. Version 2. Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):13892-6. doi: 10.1073/pnas.0903105106. Epub 2009 Aug 4. Proc Natl Acad Sci U S A. 2009. PMID: 19666517 Free PMC article.
Toll Genes Have an Ancestral Role in Axis Elongation.
Benton MA, Pechmann M, Frey N, Stappert D, Conrads KH, Chen YT, Stamataki E, Pavlopoulos A, Roth S. Benton MA, et al. Among authors: Pavlopoulos A. Curr Biol. 2016 Jun 20;26(12):1609-1615. doi: 10.1016/j.cub.2016.04.055. Epub 2016 May 19. Curr Biol. 2016. PMID: 27212406 Free article.
Reconfiguring gene traps for new tasks using iTRAC.
Kontarakis Z, Konstantinides N, Pavlopoulos A, Averof M. Kontarakis Z, et al. Among authors: Pavlopoulos A. Fly (Austin). 2011 Oct-Dec;5(4):352-5. doi: 10.4161/fly.5.4.18108. Epub 2011 Oct 1. Fly (Austin). 2011. PMID: 22004889 Free PMC article.
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