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Docking for Molecules That Bind in a Symmetric Stack with SymDOCK.
Smith MS, Knight IS, Kormos RC, Pepe JG, Kunach P, Diamond MI, Shahmoradian SH, Irwin JJ, DeGrado WF, Shoichet BK. Smith MS, et al. Among authors: pepe jg. J Chem Inf Model. 2024 Jan 22;64(2):425-434. doi: 10.1021/acs.jcim.3c01749. Epub 2024 Jan 8. J Chem Inf Model. 2024. PMID: 38191997 Free PMC article.
Five draft genome assemblies from Bacillaceae isolated from a degraded wetland environment.
McLoon AL, Ackaah Asante P, Anderson T, Cahill K, Cochrane D, Cohen K, German J, Hrubes CM, LaCroix I, McNamee K, Mossakowski A, Nichter AM, Pepe JL, Schofield AT. McLoon AL, et al. Among authors: pepe jl. Microbiol Resour Announc. 2024 Feb 15;13(2):e0084523. doi: 10.1128/mra.00845-23. Epub 2023 Dec 22. Microbiol Resour Announc. 2024. PMID: 38132715 Free PMC article.
Docking for molecules that bind in a symmetric stack with SymDOCK.
Smith MS, Knight IS, Kormos RC, Pepe JG, Kunach P, Diamond MI, Shahmoradian SH, Irwin JJ, DeGrado WF, Shoichet BK. Smith MS, et al. Among authors: pepe jg. bioRxiv [Preprint]. 2023 Oct 29:2023.10.27.564400. doi: 10.1101/2023.10.27.564400. bioRxiv. 2023. PMID: 37961414 Free PMC article. Updated. Preprint.
Structural basis of peptidoglycan synthesis by E. coli RodA-PBP2 complex.
Nygaard R, Graham CLB, Belcher Dufrisne M, Colburn JD, Pepe J, Hydorn MA, Corradi S, Brown CM, Ashraf KU, Vickery ON, Briggs NS, Deering JJ, Kloss B, Botta B, Clarke OB, Columbus L, Dworkin J, Stansfeld PJ, Roper DI, Mancia F. Nygaard R, et al. Among authors: pepe j. Nat Commun. 2023 Aug 24;14(1):5151. doi: 10.1038/s41467-023-40483-8. Nat Commun. 2023. PMID: 37620344 Free PMC article.
246 results