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Predicting Fecundity of Fathead Minnows (Pimephales promelas) Exposed to Endocrine-Disrupting Chemicals Using a MATLABĀ®-Based Model of Oocyte Growth Dynamics.
Watanabe KH, Mayo M, Jensen KM, Villeneuve DL, Ankley GT, Perkins EJ. Watanabe KH, et al. PLoS One. 2016 Jan 12;11(1):e0146594. doi: 10.1371/journal.pone.0146594. eCollection 2016. PLoS One. 2016. PMID: 26756814 Free PMC article.
Natural Variation in Fish Transcriptomes: Comparative Analysis of the Fathead Minnow (Pimephales promelas) and Zebrafish (Danio rerio).
Wang RL, Bencic DC, Garcia-Reyero N, Perkins EJ, Villeneuve DL, Ankley GT, Biales AD. Wang RL, et al. PLoS One. 2014 Dec 10;9(12):e114178. doi: 10.1371/journal.pone.0114178. eCollection 2014. PLoS One. 2014. PMID: 25493933 Free PMC article.
Systematic Omics Analysis Review (SOAR) tool to support risk assessment.
McConnell ER, Bell SM, Cote I, Wang RL, Perkins EJ, Garcia-Reyero N, Gong P, Burgoon LD. McConnell ER, et al. PLoS One. 2014 Dec 22;9(12):e110379. doi: 10.1371/journal.pone.0110379. eCollection 2014. PLoS One. 2014. PMID: 25531884 Free PMC article.
CAPRG: sequence assembling pipeline for next generation sequencing of non-model organisms.
Rawat A, Elasri MO, Gust KA, George G, Pham D, Scanlan LD, Vulpe C, Perkins EJ. Rawat A, et al. PLoS One. 2012;7(2):e30370. doi: 10.1371/journal.pone.0030370. Epub 2012 Feb 3. PLoS One. 2012. PMID: 22319566 Free PMC article.
Top-level dynamics and the regulated gene response of feed-forward loop transcriptional motifs.
Mayo M, Abdelzaher A, Perkins EJ, Ghosh P. Mayo M, et al. Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Sep;90(3):032706. doi: 10.1103/PhysRevE.90.032706. Epub 2014 Sep 10. Phys Rev E Stat Nonlin Soft Matter Phys. 2014. PMID: 25314472
Gene expression analysis of CL-20-induced reversible neurotoxicity reveals GABA(A) receptors as potential targets in the earthworm Eisenia fetida.
Gong P, Guan X, Pirooznia M, Liang C, Perkins EJ. Gong P, et al. Environ Sci Technol. 2012 Jan 17;46(2):1223-32. doi: 10.1021/es203642e. Epub 2012 Jan 6. Environ Sci Technol. 2012. PMID: 22191394 Free PMC article.
Predicting chemical bioavailability using microarray gene expression data and regression modeling: A tale of three explosive compounds.
Gong P, Nan X, Barker ND, Boyd RE, Chen Y, Wilkins DE, Johnson DR, Suedel BC, Perkins EJ. Gong P, et al. BMC Genomics. 2016 Mar 8;17:205. doi: 10.1186/s12864-016-2541-5. BMC Genomics. 2016. PMID: 26956490 Free PMC article.
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