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Mtf2-PRC2 control of canonical Wnt signaling is required for definitive erythropoiesis.
Rothberg JLM, Maganti HB, Jrade H, Porter CJ, Palidwor GA, Cafariello C, Battaion HL, Khan ST, Perkins TJ, Paulson RF, Ito CY, Stanford WL. Rothberg JLM, et al. Among authors: perkins tj. Cell Discov. 2018 May 1;4:21. doi: 10.1038/s41421-018-0022-5. eCollection 2018. Cell Discov. 2018. PMID: 29736258 Free PMC article.
A general model of codon bias due to GC mutational bias.
Palidwor GA, Perkins TJ, Xia X. Palidwor GA, et al. Among authors: perkins tj. PLoS One. 2010 Oct 27;5(10):e13431. doi: 10.1371/journal.pone.0013431. PLoS One. 2010. PMID: 21048949 Free PMC article.
Transcriptional dominance of Pax7 in adult myogenesis is due to high-affinity recognition of homeodomain motifs.
Soleimani VD, Punch VG, Kawabe Y, Jones AE, Palidwor GA, Porter CJ, Cross JW, Carvajal JJ, Kockx CE, van IJcken WF, Perkins TJ, Rigby PW, Grosveld F, Rudnicki MA. Soleimani VD, et al. Among authors: perkins tj. Dev Cell. 2012 Jun 12;22(6):1208-20. doi: 10.1016/j.devcel.2012.03.014. Epub 2012 May 17. Dev Cell. 2012. PMID: 22609161 Free PMC article.
Chromatin tandem affinity purification sequencing.
Soleimani VD, Palidwor GA, Ramachandran P, Perkins TJ, Rudnicki MA. Soleimani VD, et al. Among authors: perkins tj. Nat Protoc. 2013 Aug;8(8):1525-34. doi: 10.1038/nprot.2013.088. Epub 2013 Jul 11. Nat Protoc. 2013. PMID: 23845964 Free PMC article.
Integrative genomics positions MKRN1 as a novel ribonucleoprotein within the embryonic stem cell gene regulatory network.
Cassar PA, Carpenedo RL, Samavarchi-Tehrani P, Olsen JB, Park CJ, Chang WY, Chen Z, Choey C, Delaney S, Guo H, Guo H, Tanner RM, Perkins TJ, Tenenbaum SA, Emili A, Wrana JL, Gibbings D, Stanford WL. Cassar PA, et al. Among authors: perkins tj. EMBO Rep. 2015 Oct;16(10):1334-57. doi: 10.15252/embr.201540974. Epub 2015 Aug 11. EMBO Rep. 2015. PMID: 26265008 Free PMC article.
Reprogramming progeria fibroblasts re-establishes a normal epigenetic landscape.
Chen Z, Chang WY, Etheridge A, Strickfaden H, Jin Z, Palidwor G, Cho JH, Wang K, Kwon SY, Doré C, Raymond A, Hotta A, Ellis J, Kandel RA, Dilworth FJ, Perkins TJ, Hendzel MJ, Galas DJ, Stanford WL. Chen Z, et al. Among authors: perkins tj. Aging Cell. 2017 Aug;16(4):870-887. doi: 10.1111/acel.12621. Epub 2017 Jun 8. Aging Cell. 2017. PMID: 28597562 Free PMC article.
Cis-regulatory determinants of MyoD function.
Soleimani VD, Nguyen D, Ramachandran P, Palidwor GA, Porter CJ, Yin H, Perkins TJ, Rudnicki MA. Soleimani VD, et al. Among authors: perkins tj. Nucleic Acids Res. 2018 Aug 21;46(14):7221-7235. doi: 10.1093/nar/gky388. Nucleic Acids Res. 2018. PMID: 30016497 Free PMC article.
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