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Structural basis of substrate specificity in the serine proteases.
Perona JJ, Craik CS. Perona JJ, et al. Protein Sci. 1995 Mar;4(3):337-60. doi: 10.1002/pro.5560040301. Protein Sci. 1995. PMID: 7795518 Free PMC article. Review.
Synthesis of Glu-tRNA(Gln) by engineered and natural aminoacyl-tRNA synthetases.
Rodríguez-Hernández A, Bhaskaran H, Hadd A, Perona JJ. Rodríguez-Hernández A, et al. Among authors: perona jj. Biochemistry. 2010 Aug 10;49(31):6727-36. doi: 10.1021/bi100886z. Biochemistry. 2010. PMID: 20617848 Free PMC article.
Heat maps for intramolecular communication in an RNP enzyme encoding glutamine.
Rodríguez-Hernández A, Perona JJ. Rodríguez-Hernández A, et al. Among authors: perona jj. Structure. 2011 Mar 9;19(3):386-96. doi: 10.1016/j.str.2010.12.017. Structure. 2011. PMID: 21397189
Architectural underpinnings of the genetic code for glutamine.
Corigliano EM, Perona JJ. Corigliano EM, et al. Among authors: perona jj. Biochemistry. 2009 Feb 3;48(4):676-87. doi: 10.1021/bi801552y. Biochemistry. 2009. PMID: 19128026 Free PMC article.
A rationally engineered misacylating aminoacyl-tRNA synthetase.
Bullock TL, Rodríguez-Hernández A, Corigliano EM, Perona JJ. Bullock TL, et al. Among authors: perona jj. Proc Natl Acad Sci U S A. 2008 May 27;105(21):7428-33. doi: 10.1073/pnas.0711812105. Epub 2008 May 13. Proc Natl Acad Sci U S A. 2008. PMID: 18477696 Free PMC article.
Positively charged C-terminal subdomains of EcoRV endonuclease: contributions to DNA binding, bending, and cleavage.
Hiller DA, Perona JJ. Hiller DA, et al. Among authors: perona jj. Biochemistry. 2006 Sep 26;45(38):11453-63. doi: 10.1021/bi0606400. Biochemistry. 2006. PMID: 16981705 Free PMC article.
Active-site assembly in glutaminyl-tRNA synthetase by tRNA-mediated induced fit.
Uter NT, Perona JJ. Uter NT, et al. Among authors: perona jj. Biochemistry. 2006 Jun 6;45(22):6858-65. doi: 10.1021/bi052606b. Biochemistry. 2006. PMID: 16734422 Free PMC article.
Non-cognate enzyme-DNA complex: structural and kinetic analysis of EcoRV endonuclease bound to the EcoRI recognition site GAATTC.
Hiller DA, Rodriguez AM, Perona JJ. Hiller DA, et al. Among authors: perona jj. J Mol Biol. 2005 Nov 18;354(1):121-36. doi: 10.1016/j.jmb.2005.09.046. Epub 2005 Oct 3. J Mol Biol. 2005. PMID: 16236314
Shape-selective RNA recognition by cysteinyl-tRNA synthetase.
Hauenstein S, Zhang CM, Hou YM, Perona JJ. Hauenstein S, et al. Among authors: perona jj. Nat Struct Mol Biol. 2004 Nov;11(11):1134-41. doi: 10.1038/nsmb849. Epub 2004 Oct 17. Nat Struct Mol Biol. 2004. PMID: 15489861
tRNA-dependent active site assembly in a class I aminoacyl-tRNA synthetase.
Sherlin LD, Perona JJ. Sherlin LD, et al. Among authors: perona jj. Structure. 2003 May;11(5):591-603. doi: 10.1016/s0969-2126(03)00074-1. Structure. 2003. PMID: 12737824
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