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Common markers of proliferation.
Whitfield ML, George LK, Grant GD, Perou CM. Whitfield ML, et al. Nat Rev Cancer. 2006 Feb;6(2):99-106. doi: 10.1038/nrc1802. Nat Rev Cancer. 2006. PMID: 16491069 Review.
Systematic variation in gene expression patterns in human cancer cell lines.
Ross DT, Scherf U, Eisen MB, Perou CM, Rees C, Spellman P, Iyer V, Jeffrey SS, Van de Rijn M, Waltham M, Pergamenschikov A, Lee JC, Lashkari D, Shalon D, Myers TG, Weinstein JN, Botstein D, Brown PO. Ross DT, et al. Nat Genet. 2000 Mar;24(3):227-35. doi: 10.1038/73432. Nat Genet. 2000. PMID: 10700174
Molecular portraits of human breast tumours.
Perou CM, Sørlie T, Eisen MB, van de Rijn M, Jeffrey SS, Rees CA, Pollack JR, Ross DT, Johnsen H, Akslen LA, Fluge O, Pergamenschikov A, Williams C, Zhu SX, Lønning PE, Børresen-Dale AL, Brown PO, Botstein D. Perou CM, et al. Nature. 2000 Aug 17;406(6797):747-52. doi: 10.1038/35021093. Nature. 2000. PMID: 10963602
Diversity of gene expression in adenocarcinoma of the lung.
Garber ME, Troyanskaya OG, Schluens K, Petersen S, Thaesler Z, Pacyna-Gengelbach M, van de Rijn M, Rosen GD, Perou CM, Whyte RI, Altman RB, Brown PO, Botstein D, Petersen I. Garber ME, et al. Proc Natl Acad Sci U S A. 2001 Nov 20;98(24):13784-9. doi: 10.1073/pnas.241500798. Epub 2001 Nov 13. Proc Natl Acad Sci U S A. 2001. PMID: 11707590 Free PMC article.
Identification of genes periodically expressed in the human cell cycle and their expression in tumors.
Whitfield ML, Sherlock G, Saldanha AJ, Murray JI, Ball CA, Alexander KE, Matese JC, Perou CM, Hurt MM, Brown PO, Botstein D. Whitfield ML, et al. Mol Biol Cell. 2002 Jun;13(6):1977-2000. doi: 10.1091/mbc.02-02-0030. Mol Biol Cell. 2002. PMID: 12058064 Free PMC article.
Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors.
Pollack JR, Sørlie T, Perou CM, Rees CA, Jeffrey SS, Lonning PE, Tibshirani R, Botstein D, Børresen-Dale AL, Brown PO. Pollack JR, et al. Proc Natl Acad Sci U S A. 2002 Oct 1;99(20):12963-8. doi: 10.1073/pnas.162471999. Epub 2002 Sep 24. Proc Natl Acad Sci U S A. 2002. PMID: 12297621 Free PMC article.
Repeated observation of breast tumor subtypes in independent gene expression data sets.
Sorlie T, Tibshirani R, Parker J, Hastie T, Marron JS, Nobel A, Deng S, Johnsen H, Pesich R, Geisler S, Demeter J, Perou CM, Lønning PE, Brown PO, Børresen-Dale AL, Botstein D. Sorlie T, et al. Proc Natl Acad Sci U S A. 2003 Jul 8;100(14):8418-23. doi: 10.1073/pnas.0932692100. Epub 2003 Jun 26. Proc Natl Acad Sci U S A. 2003. PMID: 12829800 Free PMC article.
Molecular classification of head and neck squamous cell carcinomas using patterns of gene expression.
Chung CH, Parker JS, Karaca G, Wu J, Funkhouser WK, Moore D, Butterfoss D, Xiang D, Zanation A, Yin X, Shockley WW, Weissler MC, Dressler LG, Shores CG, Yarbrough WG, Perou CM. Chung CH, et al. Cancer Cell. 2004 May;5(5):489-500. doi: 10.1016/s1535-6108(04)00112-6. Cancer Cell. 2004. PMID: 15144956
Cell-type-specific responses to chemotherapeutics in breast cancer.
Troester MA, Hoadley KA, Sørlie T, Herbert BS, Børresen-Dale AL, Lønning PE, Shay JW, Kaufmann WK, Perou CM. Troester MA, et al. Cancer Res. 2004 Jun 15;64(12):4218-26. doi: 10.1158/0008-5472.CAN-04-0107. Cancer Res. 2004. PMID: 15205334
A custom microarray platform for analysis of microRNA gene expression.
Thomson JM, Parker J, Perou CM, Hammond SM. Thomson JM, et al. Nat Methods. 2004 Oct;1(1):47-53. doi: 10.1038/nmeth704. Epub 2004 Sep 29. Nat Methods. 2004. PMID: 15782152
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