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Structural insights into ligand binding and gene expression control by an adenosylcobalamin riboswitch.
Peselis A, Serganov A. Peselis A, et al. Nat Struct Mol Biol. 2012 Nov;19(11):1182-4. doi: 10.1038/nsmb.2405. Epub 2012 Oct 14. Nat Struct Mol Biol. 2012. PMID: 23064646
RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures.
Miao Z, Adamiak RW, Blanchet MF, Boniecki M, Bujnicki JM, Chen SJ, Cheng C, Chojnowski G, Chou FC, Cordero P, Cruz JA, Ferré-D'Amaré AR, Das R, Ding F, Dokholyan NV, Dunin-Horkawicz S, Kladwang W, Krokhotin A, Lach G, Magnus M, Major F, Mann TH, Masquida B, Matelska D, Meyer M, Peselis A, Popenda M, Purzycka KJ, Serganov A, Stasiewicz J, Szachniuk M, Tandon A, Tian S, Wang J, Xiao Y, Xu X, Zhang J, Zhao P, Zok T, Westhof E. Miao Z, et al. Among authors: peselis a. RNA. 2015 Jun;21(6):1066-84. doi: 10.1261/rna.049502.114. Epub 2015 Apr 16. RNA. 2015. PMID: 25883046 Free PMC article.
Preparation and Crystallization of Riboswitches.
Peselis A, Gao A, Serganov A. Peselis A, et al. Methods Mol Biol. 2016;1320:21-36. doi: 10.1007/978-1-4939-2763-0_3. Methods Mol Biol. 2016. PMID: 26227035
ykkC riboswitches employ an add-on helix to adjust specificity for polyanionic ligands.
Peselis A, Serganov A. Peselis A, et al. Nat Chem Biol. 2018 Sep;14(9):887-894. doi: 10.1038/s41589-018-0114-4. Epub 2018 Aug 17. Nat Chem Biol. 2018. PMID: 30120360 Free PMC article.
Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.
Ren A, Xue Y, Peselis A, Serganov A, Al-Hashimi HM, Patel DJ. Ren A, et al. Among authors: peselis a. Cell Rep. 2015 Dec 1;13(9):1800-13. doi: 10.1016/j.celrep.2015.10.062. Epub 2015 Nov 19. Cell Rep. 2015. PMID: 26655897 Free PMC article.
Cooperativity, allostery and synergism in ligand binding to riboswitches.
Peselis A, Gao A, Serganov A. Peselis A, et al. Biochimie. 2015 Oct;117:100-9. doi: 10.1016/j.biochi.2015.06.028. Epub 2015 Jul 2. Biochimie. 2015. PMID: 26143008 Free PMC article. Review.
Structure and function of pseudoknots involved in gene expression control.
Peselis A, Serganov A. Peselis A, et al. Wiley Interdiscip Rev RNA. 2014 Nov-Dec;5(6):803-22. doi: 10.1002/wrna.1247. Epub 2014 Jul 8. Wiley Interdiscip Rev RNA. 2014. PMID: 25044223 Free PMC article. Review.
Themes and variations in riboswitch structure and function.
Peselis A, Serganov A. Peselis A, et al. Biochim Biophys Acta. 2014 Oct;1839(10):908-918. doi: 10.1016/j.bbagrm.2014.02.012. Epub 2014 Feb 28. Biochim Biophys Acta. 2014. PMID: 24583553 Free PMC article. Review.
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