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Page 1
Macromolecular modeling and design in Rosetta: recent methods and frameworks.
Leman JK, Weitzner BD, Lewis SM, Adolf-Bryfogle J, Alam N, Alford RF, Aprahamian M, Baker D, Barlow KA, Barth P, Basanta B, Bender BJ, Blacklock K, Bonet J, Boyken SE, Bradley P, Bystroff C, Conway P, Cooper S, Correia BE, Coventry B, Das R, De Jong RM, DiMaio F, Dsilva L, Dunbrack R, Ford AS, Frenz B, Fu DY, Geniesse C, Goldschmidt L, Gowthaman R, Gray JJ, Gront D, Guffy S, Horowitz S, Huang PS, Huber T, Jacobs TM, Jeliazkov JR, Johnson DK, Kappel K, Karanicolas J, Khakzad H, Khar KR, Khare SD, Khatib F, Khramushin A, King IC, Kleffner R, Koepnick B, Kortemme T, Kuenze G, Kuhlman B, Kuroda D, Labonte JW, Lai JK, Lapidoth G, Leaver-Fay A, Lindert S, Linsky T, London N, Lubin JH, Lyskov S, Maguire J, Malmström L, Marcos E, Marcu O, Marze NA, Meiler J, Moretti R, Mulligan VK, Nerli S, Norn C, Ó'Conchúir S, Ollikainen N, Ovchinnikov S, Pacella MS, Pan X, Park H, Pavlovicz RE, Pethe M, Pierce BG, Pilla KB, Raveh B, Renfrew PD, Burman SSR, Rubenstein A, Sauer MF, Scheck A, Schief W, Schueler-Furman O, Sedan Y, Sevy AM, Sgourakis NG, Shi L, Siegel JB, Silva DA, Smith S, Song Y, Stein A, Szegedy M, Teets FD, Thyme SB, Wang RY, Watkins A, Zimmerman L, Bonneau R. Leman JK, et al. Among authors: pethe m. Nat Methods. 2020 Jul;17(7):665-680. doi: 10.1038/s41592-020-0848-2. Epub 2020 Jun 1. Nat Methods. 2020. PMID: 32483333 Free PMC article. Review.
BEDAM binding free energy predictions for the SAMPL4 octa-acid host challenge.
Gallicchio E, Chen H, Chen H, Fitzgerald M, Gao Y, He P, Kalyanikar M, Kao C, Lu B, Niu Y, Pethe M, Zhu J, Levy RM. Gallicchio E, et al. Among authors: pethe m. J Comput Aided Mol Des. 2015 Apr;29(4):315-25. doi: 10.1007/s10822-014-9795-2. Epub 2015 Mar 1. J Comput Aided Mol Des. 2015. PMID: 25726024 Free PMC article.
Spontaneous Pneumomediastinum in a Case of Mixed Connective Tissue Disorder.
Vardhan V, Marwah V, Rai SP, Patil AP, Murlidhar R, Pethe M. Vardhan V, et al. Among authors: pethe m. Med J Armed Forces India. 2008 Oct;64(4):367-8. doi: 10.1016/S0377-1237(08)80027-5. Epub 2011 Jul 21. Med J Armed Forces India. 2008. PMID: 27688580 Free PMC article. No abstract available.
Intraluminal Bronchial Carcinoid Resection by Bronchoscopy.
Rai SP, Patil AP, Vardhan V, Kumar R, Bhattacharya P, Pethe M. Rai SP, et al. Among authors: pethe m. Med J Armed Forces India. 2008 Jan;64(1):86-8. doi: 10.1016/S0377-1237(08)80164-5. Epub 2011 Jul 21. Med J Armed Forces India. 2008. PMID: 27408094 Free PMC article. No abstract available.
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