Pinchuk GE - Search Results

1

Genome-scale modeling of light-driven reductant partitioning and carbon fluxes in diazotrophic unicellular cyanobacterium Cyanothece sp. ATCC 51142.

Vu TT, Stolyar SM, Pinchuk GE, Hill EA, Kucek LA, Brown RN, Lipton MS, Osterman A, Fredrickson JK, Konopka AE, Beliaev AS, Reed JL. Vu TT, et al. Among authors: pinchuk ge. PLoS Comput Biol. 2012;8(4):e1002460. doi: 10.1371/journal.pcbi.1002460. Epub 2012 Apr 5. PLoS Comput Biol. 2012. PMID: 22529767 Free PMC article.

2

Sustained H(2) production driven by photosynthetic water splitting in a unicellular cyanobacterium.

Melnicki MR, Pinchuk GE, Hill EA, Kucek LA, Fredrickson JK, Konopka A, Beliaev AS. Melnicki MR, et al. Among authors: pinchuk ge. mBio. 2012 Aug 7;3(4):e00197-12. doi: 10.1128/mBio.00197-12. Print 2012. mBio. 2012. PMID: 22872781 Free PMC article.

3

Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation.

Pinchuk GE, Hill EA, Geydebrekht OV, De Ingeniis J, Zhang X, Osterman A, Scott JH, Reed SB, Romine MF, Konopka AE, Beliaev AS, Fredrickson JK, Reed JL. Pinchuk GE, et al. PLoS Comput Biol. 2010 Jun 24;6(6):e1000822. doi: 10.1371/journal.pcbi.1000822. PLoS Comput Biol. 2010. PMID: 20589080 Free PMC article.

4

Dynamic modeling of aerobic growth of Shewanella oneidensis. Predicting triauxic growth, flux distributions, and energy requirement for growth.

Song HS, Ramkrishna D, Pinchuk GE, Beliaev AS, Konopka AE, Fredrickson JK. Song HS, et al. Among authors: pinchuk ge. Metab Eng. 2013 Jan;15:25-33. doi: 10.1016/j.ymben.2012.08.004. Epub 2012 Sep 26. Metab Eng. 2013. PMID: 23022551

5

Feedback-controlled LED photobioreactor for photophysiological studies of cyanobacteria.

Melnicki MR, Pinchuk GE, Hill EA, Kucek LA, Stolyar SM, Fredrickson JK, Konopka AE, Beliaev AS. Melnicki MR, et al. Among authors: pinchuk ge. Bioresour Technol. 2013 Apr;134:127-33. doi: 10.1016/j.biortech.2013.01.079. Epub 2013 Feb 10. Bioresour Technol. 2013. PMID: 23500569

6

Conversion of stranded waste-stream carbon and nutrients into value-added products via metabolically coupled binary heterotroph-photoautotroph system.

Bohutskyi P, Kucek LA, Hill E, Pinchuk GE, Mundree SG, Beliaev AS. Bohutskyi P, et al. Among authors: pinchuk ge. Bioresour Technol. 2018 Jul;260:68-75. doi: 10.1016/j.biortech.2018.02.080. Epub 2018 Feb 19. Bioresour Technol. 2018. PMID: 29614453

7

Inference of interactions in cyanobacterial-heterotrophic co-cultures via transcriptome sequencing.

Beliaev AS, Romine MF, Serres M, Bernstein HC, Linggi BE, Markillie LM, Isern NG, Chrisler WB, Kucek LA, Hill EA, Pinchuk GE, Bryant DA, Wiley HS, Fredrickson JK, Konopka A. Beliaev AS, et al. Among authors: pinchuk ge. ISME J. 2014 Nov;8(11):2243-55. doi: 10.1038/ismej.2014.69. Epub 2014 Apr 29. ISME J. 2014. PMID: 24781900 Free PMC article.

8

Pyruvate and lactate metabolism by Shewanella oneidensis MR-1 under fermentation, oxygen limitation, and fumarate respiration conditions.

Pinchuk GE, Geydebrekht OV, Hill EA, Reed JL, Konopka AE, Beliaev AS, Fredrickson JK. Pinchuk GE, et al. Appl Environ Microbiol. 2011 Dec;77(23):8234-40. doi: 10.1128/AEM.05382-11. Epub 2011 Sep 30. Appl Environ Microbiol. 2011. PMID: 21965410 Free PMC article.

9

Utilization of DNA as a sole source of phosphorus, carbon, and energy by Shewanella spp.: ecological and physiological implications for dissimilatory metal reduction.

Pinchuk GE, Ammons C, Culley DE, Li SM, McLean JS, Romine MF, Nealson KH, Fredrickson JK, Beliaev AS. Pinchuk GE, et al. Appl Environ Microbiol. 2008 Feb;74(4):1198-208. doi: 10.1128/AEM.02026-07. Epub 2007 Dec 21. Appl Environ Microbiol. 2008. PMID: 18156329 Free PMC article.

10

Towards environmental systems biology of Shewanella.

Fredrickson JK, Romine MF, Beliaev AS, Auchtung JM, Driscoll ME, Gardner TS, Nealson KH, Osterman AL, Pinchuk G, Reed JL, Rodionov DA, Rodrigues JL, Saffarini DA, Serres MH, Spormann AM, Zhulin IB, Tiedje JM. Fredrickson JK, et al. Nat Rev Microbiol. 2008 Aug;6(8):592-603. doi: 10.1038/nrmicro1947. Epub 2008 Jul 7. Nat Rev Microbiol. 2008. PMID: 18604222 Review.

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