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Crystal structure of the abl-SH3 domain complexed with a designed high-affinity peptide ligand: implications for SH3-ligand interactions.
Pisabarro MT, Serrano L, Wilmanns M. Pisabarro MT, et al. J Mol Biol. 1998 Aug 21;281(3):513-21. doi: 10.1006/jmbi.1998.1932. J Mol Biol. 1998. PMID: 9698566
Multipose binding in molecular docking.
Atkovska K, Samsonov SA, Paszkowski-Rogacz M, Pisabarro MT. Atkovska K, et al. Among authors: pisabarro mt. Int J Mol Sci. 2014 Feb 14;15(2):2622-45. doi: 10.3390/ijms15022622. Int J Mol Sci. 2014. PMID: 24534807 Free PMC article.
Rational design of specific high-affinity peptide ligands for the Abl-SH3 domain.
Pisabarro MT, Serrano L. Pisabarro MT, et al. Biochemistry. 1996 Aug 20;35(33):10634-40. doi: 10.1021/bi960203t. Biochemistry. 1996. PMID: 8718852
Homology modeling of the Abl-SH3 domain.
Pisabarro MT, Ortiz AR, Serrano L, Wade RC. Pisabarro MT, et al. Proteins. 1994 Nov;20(3):203-15. doi: 10.1002/prot.340200302. Proteins. 1994. PMID: 7892170
Molecular modeling of the interaction of polyproline-based peptides with the Abl-SH3 domain: rational modification of the interaction.
Pisabarro MT, Ortiz AR, Viguera AR, Gago F, Serrano L. Pisabarro MT, et al. Protein Eng. 1994 Dec;7(12):1455-62. doi: 10.1093/protein/7.12.1455. Protein Eng. 1994. PMID: 7716156
Obligatory steps in protein folding and the conformational diversity of the transition state.
Martinez JC, Pisabarro MT, Serrano L. Martinez JC, et al. Among authors: pisabarro mt. Nat Struct Biol. 1998 Aug;5(8):721-9. doi: 10.1038/1418. Nat Struct Biol. 1998. PMID: 9699637
A miniprotein scaffold used to assemble the polyproline II binding epitope recognized by SH3 domains.
Cobos ES, Pisabarro MT, Vega MC, Lacroix E, Serrano L, Ruiz-Sanz J, Martinez JC. Cobos ES, et al. Among authors: pisabarro mt. J Mol Biol. 2004 Sep 3;342(1):355-65. doi: 10.1016/j.jmb.2004.06.078. J Mol Biol. 2004. PMID: 15313630
Role of interfacial water molecules in proline-rich ligand recognition by the Src homology 3 domain of Abl.
Palencia A, Camara-Artigas A, Pisabarro MT, Martinez JC, Luque I. Palencia A, et al. Among authors: pisabarro mt. J Biol Chem. 2010 Jan 22;285(4):2823-33. doi: 10.1074/jbc.M109.048033. Epub 2009 Nov 10. J Biol Chem. 2010. PMID: 19906645 Free PMC article.
Prediction of drug binding affinities by comparative binding energy analysis.
Ortiz AR, Pisabarro MT, Gago F, Wade RC. Ortiz AR, et al. Among authors: pisabarro mt. J Med Chem. 1995 Jul 7;38(14):2681-91. doi: 10.1021/jm00014a020. J Med Chem. 1995. PMID: 7629807
Residue 75 of interleukin-8 is crucial for its interactions with glycosaminoglycans.
Nordsieck K, Pichert A, Samsonov SA, Thomas L, Berger C, Pisabarro MT, Huster D, Beck-Sickinger AG. Nordsieck K, et al. Among authors: pisabarro mt. Chembiochem. 2012 Nov 26;13(17):2558-66. doi: 10.1002/cbic.201200467. Epub 2012 Oct 15. Chembiochem. 2012. PMID: 23070988
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