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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1999 1
2002 2
2004 2
2005 4
2006 4
2007 4
2008 7
2009 5
2010 7
2011 9
2012 4
2013 2
2014 3
2015 8
2016 10
2017 3
2018 14
2019 16
2020 14
2021 6
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105 results
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Page 1
A global reference for human genetic variation.
1000 Genomes Project Consortium, Auton A, Brooks LD, Durbin RM, Garrison EP, Kang HM, Korbel JO, Marchini JL, McCarthy S, McVean GA, Abecasis GR. 1000 Genomes Project Consortium, et al. Nature. 2015 Oct 1;526(7571):68-74. doi: 10.1038/nature15393. Nature. 2015. PMID: 26432245 Free PMC article.
CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription.
Tang Z, Luo OJ, Li X, Zheng M, Zhu JJ, Szalaj P, Trzaskoma P, Magalska A, Wlodarczyk J, Ruszczycki B, Michalski P, Piecuch E, Wang P, Wang D, Tian SZ, Penrad-Mobayed M, Sachs LM, Ruan X, Wei CL, Liu ET, Wilczynski GM, Plewczynski D, Li G, Ruan Y. Tang Z, et al. Cell. 2015 Dec 17;163(7):1611-27. doi: 10.1016/j.cell.2015.11.024. Epub 2015 Dec 10. Cell. 2015. PMID: 26686651 Free PMC article.
Free energy-based model of CTCF-mediated chromatin looping in the human genome.
Dawson WK, Lazniewski M, Plewczynski D. Dawson WK, et al. Methods. 2020 Oct 1;181-182:35-51. doi: 10.1016/j.ymeth.2020.05.025. Epub 2020 Jul 6. Methods. 2020. PMID: 32645447
The program source-code is available at https://github.com/plewczynski/looper....
The program source-code is available at https://github.com/plewczynski/looper....
Intermingling of chromosome territories.
Szczepińska T, Rusek AM, Plewczynski D. Szczepińska T, et al. Genes Chromosomes Cancer. 2019 Jul;58(7):500-506. doi: 10.1002/gcc.22736. Epub 2019 Mar 3. Genes Chromosomes Cancer. 2019. PMID: 30828902 Review.
Emerging and threatening infectious diseases.
Basu S, Plewczynski D. Basu S, et al. Brief Funct Genomics. 2018 Nov 26;17(6):372-373. doi: 10.1093/bfgp/ely038. Brief Funct Genomics. 2018. PMID: 30476067 No abstract available.
Three-dimensional organization and dynamics of the genome.
Szalaj P, Plewczynski D. Szalaj P, et al. Cell Biol Toxicol. 2018 Oct;34(5):381-404. doi: 10.1007/s10565-018-9428-y. Epub 2018 Mar 22. Cell Biol Toxicol. 2018. PMID: 29568981 Free PMC article. Review.
Disentangling the complexity of low complexity proteins.
Mier P, Paladin L, Tamana S, Petrosian S, Hajdu-Soltész B, Urbanek A, Gruca A, Plewczynski D, Grynberg M, Bernadó P, Gáspári Z, Ouzounis CA, Promponas VJ, Kajava AV, Hancock JM, Tosatto SCE, Dosztanyi Z, Andrade-Navarro MA. Mier P, et al. Brief Bioinform. 2020 Mar 23;21(2):458-472. doi: 10.1093/bib/bbz007. Brief Bioinform. 2020. PMID: 30698641 Free PMC article. Review.
Accounting for Intraligand Interactions in Flexible Ligand Docking with a PMF-Based Scoring Function.
Lizunov AY, Gonchar AL, Zaitseva NI, Zosimov VV. Lizunov AY, et al. J Chem Inf Model. 2015 Oct 26;55(10):2121-37. doi: 10.1021/acs.jcim.5b00158. Epub 2015 Oct 8. J Chem Inf Model. 2015. PMID: 26418299
We analyzed the frequency with which intraligand contacts occurred in a set of 1300 protein-ligand complexes [ Plewczynski et al. J. Comput. Chem. 2011 , 32 , 742 - 755 .]. Our analysis showed that flexible ligands often form intraligand hydrophobic contacts, while intrali …
We analyzed the frequency with which intraligand contacts occurred in a set of 1300 protein-ligand complexes [ Plewczynski et al. J. …
Computational Approach to Dendritic Spine Taxonomy and Shape Transition Analysis.
Bokota G, Magnowska M, Kuśmierczyk T, Łukasik M, Roszkowska M, Plewczynski D. Bokota G, et al. Front Comput Neurosci. 2016 Dec 23;10:140. doi: 10.3389/fncom.2016.00140. eCollection 2016. Front Comput Neurosci. 2016. PMID: 28066226 Free PMC article.
The source code of our software is freely available for non-commercial use. CONTACT: d.plewczynski@cent.uw.edu.pl....
The source code of our software is freely available for non-commercial use. CONTACT: d.plewczynski@cent.uw.edu.pl....
105 results
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